Miyakogusa Predicted Gene

Lj3g3v1476900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476900.1 Non Chatacterized Hit- tr|I1QVY3|I1QVY3_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.52,4e-19,
,CUFF.42669.1
         (62 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g06400.1                                                       119   5e-28
Glyma19g03970.1                                                       116   7e-27

>Glyma13g06400.1 
          Length = 501

 Score =  119 bits (299), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 59/62 (95%)

Query: 1   MWYAPHSEFSNQLSEFKNAVLLAGILNSTLVVPPILDHHAVALGSCPKVQVVDPKEIRIS 60
           +WYAPHS FSNQLSEFKNAVL+AGILN TLVVPPILDHHAVALGSCPK +VVDPK++RIS
Sbjct: 77  VWYAPHSGFSNQLSEFKNAVLMAGILNRTLVVPPILDHHAVALGSCPKFRVVDPKDVRIS 136

Query: 61  VW 62
           VW
Sbjct: 137 VW 138


>Glyma19g03970.1 
          Length = 666

 Score =  116 bits (290), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/60 (83%), Positives = 56/60 (93%)

Query: 3   YAPHSEFSNQLSEFKNAVLLAGILNSTLVVPPILDHHAVALGSCPKVQVVDPKEIRISVW 62
           YAPHS FSNQLSEFKNAVL+ GILN TLVVPPILDHHAVALGSCPK ++VDPK++R+SVW
Sbjct: 269 YAPHSGFSNQLSEFKNAVLIVGILNRTLVVPPILDHHAVALGSCPKFRIVDPKDVRMSVW 328