Miyakogusa Predicted Gene

Lj3g3v1428150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1428150.1 Non Chatacterized Hit- tr|I1JKW3|I1JKW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28491
PE,31.83,2e-16,seg,NULL,CUFF.42636.1
         (314 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g15930.1                                                       336   2e-92
Glyma11g17120.1                                                       315   4e-86
Glyma03g04000.1                                                        97   3e-20
Glyma20g22280.1                                                        54   2e-07
Glyma10g28290.2                                                        53   4e-07
Glyma10g28290.1                                                        53   4e-07
Glyma01g32880.1                                                        50   4e-06

>Glyma01g15930.1 
          Length = 458

 Score =  336 bits (861), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/322 (61%), Positives = 214/322 (66%), Gaps = 42/322 (13%)

Query: 1   MSQCVPSWDIDDNPPPPRASLRSNSNSTAPDVSMLDYDVAELTWENGQPSMHGLGLPRVP 60
           MSQCVPSWD++DNPPP R SLRSNSNSTAPDV MLDY+VAELTWENGQ SMHGLGLPRVP
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP 60

Query: 61  VKSSTTTTNTAPHKEAWEKPRGSGTLESIVNQATTLPQWGKSSFVGGDNIGGVYGNVLVP 120
           VK  T  TN    K  WEKPR SGTLESIVNQ T+ P  GK + + G   GGVYGN  VP
Sbjct: 61  VKPPTAVTN----KYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNGGGGGGVYGNFRVP 116

Query: 121 WLNPHRXXXXXXXXXXNTMTMDALVPCTNRSEEKSTQVIDSAAXXXXXXXXXXXXXRVGS 180
           W +PH           NT+TMDALVPC+NR  E+S Q ++S               RVGS
Sbjct: 117 WFDPH-----ATATTTNTVTMDALVPCSNR--EQSKQGMESVP---GGTCMVGCSTRVGS 166

Query: 181 CSGVAATAAREDGAFLAEVAKRGKVATTRVPANSRDQSVSGSATFGMNSQHVTLDTCDME 240
           C G       E                    A  RDQSVSGSATFG +S+HVTLDTCD E
Sbjct: 167 CCGGKGAKGHE--------------------ATGRDQSVSGSATFGRDSKHVTLDTCDRE 206

Query: 241 FGLGFTSTSIGSLEN-------TKTTTVDDHDSVCHSKPTRGDGAE-ERKRENRKSSVCT 292
           FG+GFTSTSI SLEN       TKTTTVDDHDSV HSKP   D  E ++KR N KSSV T
Sbjct: 207 FGVGFTSTSINSLENTSSAKHCTKTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVST 266

Query: 293 KRSRAAAIHNQSERKRRDKINQ 314
           KRSRAAAIHNQSERKRRDKINQ
Sbjct: 267 KRSRAAAIHNQSERKRRDKINQ 288


>Glyma11g17120.1 
          Length = 458

 Score =  315 bits (807), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 189/324 (58%), Positives = 206/324 (63%), Gaps = 40/324 (12%)

Query: 1   MSQCVPSWDIDDNPPPPRASLRSNSNSTAPDVSMLDYDVAELTWENGQPSMHGLGLPRVP 60
           MSQCVPSWD++DNPPP R SLRSNSNSTAPDV MLDY+VAELTWENGQ SMHGLGLPRVP
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP 60

Query: 61  VKSSTTTTNTAPHKEAWEKPRGSGTLESIVNQATTLPQWGKSSFVG--GDNIGGVYGNVL 118
           VK  T  TN    K  WEKPRGSGTLESIVNQAT+     K   +       GGVYGN +
Sbjct: 61  VKPPTAATN----KYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFM 116

Query: 119 VPWLNPHRXXXXXXXXXXNTMTMDALVPCTNRSEEKSTQVIDSAAXXXXXXXXXXXXXRV 178
           VPW +PH              TMDALVPC+NR + K                      RV
Sbjct: 117 VPWFDPHAAATTTTTTTNTM-TMDALVPCSNREQGKK-----KGMESGPGTCMVGCSTRV 170

Query: 179 GSCSGVAATAAREDGAFLAEVAKRGKVATTRVPANSRDQSVSGSATFGMNSQHVTLDTCD 238
           GSC G       E                    A+ RDQSVSGSATFG +S+HVTLDTCD
Sbjct: 171 GSCCGGKGAKGHE--------------------ASGRDQSVSGSATFGRDSKHVTLDTCD 210

Query: 239 MEFGLGFTSTSIGSLEN-------TKTTTVDDHDSVCHSKPTRGDGAEE-RKRENRKSSV 290
            EFG+ FTSTSI SLEN       TKTTT+++HDSV HSKP   DG EE +KR N KSSV
Sbjct: 211 REFGVAFTSTSINSLENTSYAKHCTKTTTIEEHDSVSHSKPMGEDGDEEKKKRANGKSSV 270

Query: 291 CTKRSRAAAIHNQSERKRRDKINQ 314
            TKRSRAAAIHNQSERKRRDKINQ
Sbjct: 271 STKRSRAAAIHNQSERKRRDKINQ 294


>Glyma03g04000.1 
          Length = 397

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 144/332 (43%), Gaps = 98/332 (29%)

Query: 1   MSQCVPSWDIDDN---PPPPRASLRSNSNSTAPDVSMLDYDVAELTWENGQPSMHGLGLP 57
           MSQ VP+ D+DDN   P   +  L  N N  + +V ML Y  AEL  + GQPS +     
Sbjct: 1   MSQRVPNCDVDDNNNIPTTTKIPLLPNFNFISHEVPMLGYQAAELPCKKGQPSTYK---- 56

Query: 58  RVPVKSSTTTTNTAPHKEAWEKPRGSG-TLESIVNQATTLPQWGKSSFVGGDNIGGVYGN 116
                S    T+T      W+KPR SG TLESIV+Q  +  ++                 
Sbjct: 57  ----GSHGNLTST------WDKPRTSGGTLESIVSQHVSENRY----------------- 89

Query: 117 VLVPWLNPHRXXXXXXXXXXNTMTMDALVPCTNRSEEKSTQVIDSAAXXXXXXXXXXXXX 176
                                 +TMDALVPC   SE++ TQ                   
Sbjct: 90  --------------------KLVTMDALVPC---SEQQGTQ-------------KAVVSE 113

Query: 177 RVGSC--SGVAATAAREDGAFLAEVAKRGKVATTRVP-ANSRDQSVSGSATFGMNSQHVT 233
           R+ +C  S      A+E+    A V  RG   TT +     +D SVSGS           
Sbjct: 114 RLDACGKSRFPRVVAQEEVEKRAGVVARGTRGTTTLELGGCKDWSVSGS----------- 162

Query: 234 LDTCDMEFGLGFTSTSIGSLENTK--------TTTVDDHDSVCHSKPTRGDGAEERKREN 285
            +TC  E  + F S + GS ENT         TTT DD DS+ H + ++G+  +E  +  
Sbjct: 163 -ETCRRELSVTFNSATKGSPENTTSSGKQCTGTTTNDDRDSISH-RISQGEVPDEDYKAT 220

Query: 286 R--KSSVCTKRSRA-AAIHNQSERKRRDKINQ 314
           +  +SS   KR +A + +H QSER+RRDKINQ
Sbjct: 221 KVDRSSGSNKRIKANSVVHKQSERRRRDKINQ 252


>Glyma20g22280.1 
          Length = 426

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 254 ENTKTTTVDDHDSVCHSKPTRGDGAEERKRENRKSSVCTKRSRAAAIHNQSERKRRDKIN 313
           +N K  T D  DS CHS+    + A  +K    +    +KRSRAA +HN SER+RRD+IN
Sbjct: 122 QNLKRKTKDTDDSECHSEDVEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRDRIN 181

Query: 314 Q 314
           +
Sbjct: 182 E 182


>Glyma10g28290.2 
          Length = 590

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%)

Query: 254 ENTKTTTVDDHDSVCHSKPTRGDGAEERKRENRKSSVCTKRSRAAAIHNQSERKRRDKIN 313
           +N K    D  DS CHS+    + A  +K    +    +KRSRAA +HN SERKRRD+IN
Sbjct: 318 QNLKRKRKDTDDSECHSEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLSERKRRDRIN 377

Query: 314 Q 314
           +
Sbjct: 378 E 378


>Glyma10g28290.1 
          Length = 691

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%)

Query: 254 ENTKTTTVDDHDSVCHSKPTRGDGAEERKRENRKSSVCTKRSRAAAIHNQSERKRRDKIN 313
           +N K    D  DS CHS+    + A  +K    +    +KRSRAA +HN SERKRRD+IN
Sbjct: 419 QNLKRKRKDTDDSECHSEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLSERKRRDRIN 478

Query: 314 Q 314
           +
Sbjct: 479 E 479


>Glyma01g32880.1 
          Length = 164

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 17/94 (18%)

Query: 1   MSQCVPSWDIDD-NPPPPRASLRSNSNSTAPDVSMLDYDVAELTWENGQPSMHGLGLPRV 59
           MSQ VP+ D+DD N P        N N  + +V ML Y V EL  + GQPS +       
Sbjct: 26  MSQRVPNCDVDDSNIPTASKFPLPNFNFISHEVPMLGYQVGELPCKKGQPSTY------- 78

Query: 60  PVKSSTTTTNTAPHKEAWEKPRGS-GTLESIVNQ 92
             + S     T      W+KPR S GTLESIVNQ
Sbjct: 79  --EGSNGNLTT------WDKPRTSGGTLESIVNQ 104