Miyakogusa Predicted Gene

Lj3g3v1424000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1424000.1 tr|B9I3Z1|B9I3Z1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_773261 PE=4 SV=1,54.95,4e-19,
,81788_g.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35640.1                                                       194   3e-50
Glyma13g34780.1                                                       186   6e-48
Glyma13g11690.1                                                       120   3e-28

>Glyma12g35640.1 
          Length = 626

 Score =  194 bits (492), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/137 (73%), Positives = 112/137 (81%), Gaps = 5/137 (3%)

Query: 1   MMGLTFYELWYSSIPKEFQWIDSDQFDLQENSHVDETSFSNEVGQSEWHDSVETHMADSQ 60
           MMGLTFYELWYSSIPKEFQW +SDQFDLQENS ++ TSF+NE  QSE ++SVE+HMADSQ
Sbjct: 198 MMGLTFYELWYSSIPKEFQWRNSDQFDLQENSDMEGTSFNNETVQSERYNSVESHMADSQ 257

Query: 61  YQCDSDASVMNDRKISRDVGFNEDRGVFMEVDVNHNREKPDQNFHSQGFYLNSEEHEGMG 120
            Q DSDASVMND+KIS DV FNED    MEVD N  REKP QNF  +GFYLNSEEH+G G
Sbjct: 258 SQRDSDASVMNDKKISGDVVFNED----MEVDAN-KREKPHQNFQPEGFYLNSEEHKGFG 312

Query: 121 DPFPNSGGHTQDTLYDL 137
           DPF N+GG TQD LY L
Sbjct: 313 DPFSNNGGLTQDILYGL 329


>Glyma13g34780.1 
          Length = 583

 Score =  186 bits (472), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 99/137 (72%), Positives = 109/137 (79%), Gaps = 5/137 (3%)

Query: 1   MMGLTFYELWYSSIPKEFQWIDSDQFDLQENSHVDETSFSNEVGQSEWHDSVETHMADSQ 60
           MMGLTFYELWYSSIPKEFQW +SDQFD QENS ++ TSF+NE  QSE ++SVE+HMADSQ
Sbjct: 155 MMGLTFYELWYSSIPKEFQWRNSDQFDSQENSDMEGTSFNNETVQSEMYNSVESHMADSQ 214

Query: 61  YQCDSDASVMNDRKISRDVGFNEDRGVFMEVDVNHNREKPDQNFHSQGFYLNSEEHEGMG 120
            Q DSDASVMND KIS DV FNED    MEVD N  REKP QN   +GFYLNSEEH+G G
Sbjct: 215 SQRDSDASVMNDMKISGDVVFNED----MEVDAN-KREKPYQNVQPEGFYLNSEEHKGFG 269

Query: 121 DPFPNSGGHTQDTLYDL 137
           DPF N+GG TQD LY L
Sbjct: 270 DPFSNNGGLTQDILYGL 286


>Glyma13g11690.1 
          Length = 548

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 76/94 (80%), Gaps = 4/94 (4%)

Query: 1   MMGLTFYELWYSSIPKEFQWIDSDQFDLQENSHVDETSFSNEVGQSEWHDSVETHMADSQ 60
           MMGLTFYELWYSSIPKEFQ  +SDQF LQENS ++E SFSNE  QSE ++SVE+HMADSQ
Sbjct: 141 MMGLTFYELWYSSIPKEFQVRNSDQFHLQENSDMEEASFSNENVQSERYNSVESHMADSQ 200

Query: 61  YQCDSDASVMNDRKISRDVGFNEDRGVFMEVDVN 94
            + DSDASVMN ++IS DV FNE+    ME+D N
Sbjct: 201 SRRDSDASVMNGKQISGDVVFNEN----MEIDAN 230