Miyakogusa Predicted Gene
- Lj3g3v1409680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1409680.1 Non Chatacterized Hit- tr|B8A0Y3|B8A0Y3_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,35.89,1e-17,seg,NULL;
coiled-coil,NULL,NODE_28991_length_879_cov_25.144482.path2.1
(214 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g35200.1 303 7e-83
Glyma12g35310.2 293 8e-80
Glyma12g35310.1 293 8e-80
Glyma06g37210.1 253 8e-68
Glyma12g25000.1 253 1e-67
Glyma06g44730.1 77 2e-14
Glyma13g37230.1 76 2e-14
Glyma12g12830.1 72 5e-13
Glyma12g33230.1 71 8e-13
Glyma12g28650.1 52 7e-07
>Glyma13g35200.1
Length = 712
Score = 303 bits (777), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/226 (70%), Positives = 175/226 (77%), Gaps = 12/226 (5%)
Query: 1 MQKRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLN 60
+QKRQG+ SQSRSEKFNPHPEEVASGFPIDPPRPSQA + D VHQHKR+SHSGPL
Sbjct: 487 IQKRQGQANSQSRSEKFNPHPEEVASGFPIDPPRPSQAAGLIADPPVHQHKRSSHSGPLT 546
Query: 61 HRNV-----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITW 109
HR APKISMGGDL T SGLVA+RRSMLSD+R E SG SQAEAPKLI+
Sbjct: 547 HRAAWANKAGKNQEDAPKISMGGDLSTVSGLVAARRSMLSDDRREWSGSSQAEAPKLISR 606
Query: 110 FPGSFKDASEPLTRQDQKHHGHAPQKEEGRCS-NQDPNLVGYGSKGYKIHYSGPLLVPSS 168
FPGSFK+ASE + +QDQKHH HAPQKEEGR S N+D NLVGYGSKG+KIHYSGPLLVPSS
Sbjct: 607 FPGSFKEASESMMQQDQKHHAHAPQKEEGRGSRNKDSNLVGYGSKGHKIHYSGPLLVPSS 666
Query: 169 NTDQMLKDHDRQIQEAGXXXXXXXXXXXXXQAQGNDITNILFVSGR 214
N DQMLKDHDRQIQEA QA+G+ I+N LFVSGR
Sbjct: 667 NHDQMLKDHDRQIQEAVRRARLDKAKMRRLQAEGSQISNSLFVSGR 712
>Glyma12g35310.2
Length = 708
Score = 293 bits (750), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 168/225 (74%), Gaps = 11/225 (4%)
Query: 1 MQKRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLN 60
MQKRQG+ SQS+SEKFNPHPEEVASGFPIDPPRPSQA + D VHQHKRASHSGPL
Sbjct: 484 MQKRQGQANSQSKSEKFNPHPEEVASGFPIDPPRPSQAAGLIADPPVHQHKRASHSGPLT 543
Query: 61 HRNV----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWF 110
HR APKISM GDL T SGLVA+RRSMLSD+R E SG SQ APKLI F
Sbjct: 544 HRAAWAKAGKNQDDAPKISMVGDLSTVSGLVAARRSMLSDDRRERSGSSQTVAPKLINRF 603
Query: 111 PGSFKDASEPLTRQDQKHHGHAPQKEEGR-CSNQDPNLVGYGSKGYKIHYSGPLLVPSSN 169
PGSFK+ASE + +QDQK+H H PQKEEGR SN+D NLVGYGSKG+KIH+SGPLLVPSSN
Sbjct: 604 PGSFKEASESMMQQDQKYHAHVPQKEEGRGSSNKDSNLVGYGSKGHKIHHSGPLLVPSSN 663
Query: 170 TDQMLKDHDRQIQEAGXXXXXXXXXXXXXQAQGNDITNILFVSGR 214
DQMLKDHDRQIQE Q +GN ITN LFVSGR
Sbjct: 664 HDQMLKDHDRQIQEVVRRARLDKAKMRRLQTEGNQITNSLFVSGR 708
>Glyma12g35310.1
Length = 708
Score = 293 bits (750), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 168/225 (74%), Gaps = 11/225 (4%)
Query: 1 MQKRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLN 60
MQKRQG+ SQS+SEKFNPHPEEVASGFPIDPPRPSQA + D VHQHKRASHSGPL
Sbjct: 484 MQKRQGQANSQSKSEKFNPHPEEVASGFPIDPPRPSQAAGLIADPPVHQHKRASHSGPLT 543
Query: 61 HRNV----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWF 110
HR APKISM GDL T SGLVA+RRSMLSD+R E SG SQ APKLI F
Sbjct: 544 HRAAWAKAGKNQDDAPKISMVGDLSTVSGLVAARRSMLSDDRRERSGSSQTVAPKLINRF 603
Query: 111 PGSFKDASEPLTRQDQKHHGHAPQKEEGR-CSNQDPNLVGYGSKGYKIHYSGPLLVPSSN 169
PGSFK+ASE + +QDQK+H H PQKEEGR SN+D NLVGYGSKG+KIH+SGPLLVPSSN
Sbjct: 604 PGSFKEASESMMQQDQKYHAHVPQKEEGRGSSNKDSNLVGYGSKGHKIHHSGPLLVPSSN 663
Query: 170 TDQMLKDHDRQIQEAGXXXXXXXXXXXXXQAQGNDITNILFVSGR 214
DQMLKDHDRQIQE Q +GN ITN LFVSGR
Sbjct: 664 HDQMLKDHDRQIQEVVRRARLDKAKMRRLQTEGNQITNSLFVSGR 708
>Glyma06g37210.1
Length = 709
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/226 (65%), Positives = 161/226 (71%), Gaps = 18/226 (7%)
Query: 3 KRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLNHR 62
+RQ + S+SRSEKFNPH EE ASGFPIDPPRPSQAVEV + QV QHKRASHSGPL HR
Sbjct: 488 QRQSQAQSKSRSEKFNPHLEE-ASGFPIDPPRPSQAVEVGIEPQVPQHKRASHSGPLAHR 546
Query: 63 NV----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWFPG 112
APKIS+GGDL T SGLVA+ RSMLSD+R E SG SQ EA KL+ FPG
Sbjct: 547 TAWGKAGKNQDDAPKISVGGDLSTISGLVAA-RSMLSDDRRERSGSSQMEASKLMNRFPG 605
Query: 113 SFKDASEPLTRQDQKHH--GHA--PQKEEGRCSNQDPNLVGYGSKGYKIHYSGPLLVPSS 168
SFKD SE L +QDQ+HH G QKEEGR SN+D LVGYGSKG+KIHYSGPL SS
Sbjct: 606 SFKDISELLIKQDQRHHVPGQVGTSQKEEGRSSNKDLVLVGYGSKGHKIHYSGPL--TSS 663
Query: 169 NTDQMLKDHDRQIQEAGXXXXXXXXXXXXXQAQGNDITNILFVSGR 214
N DQ+LKDHDRQIQEA QA+GN ITN LFVSGR
Sbjct: 664 NMDQVLKDHDRQIQEAVRRARLDKAKMRRLQAEGNQITNSLFVSGR 709
>Glyma12g25000.1
Length = 710
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 160/228 (70%), Gaps = 18/228 (7%)
Query: 1 MQKRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLN 60
MQKRQ + S+SRSEKFNPHPEE ASGFPIDPPR SQAVEV ++QV QHKRASHSGPL
Sbjct: 487 MQKRQSQAQSKSRSEKFNPHPEE-ASGFPIDPPRSSQAVEVGIETQVPQHKRASHSGPLA 545
Query: 61 HRNV----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWF 110
HR APKIS+GGDL T SGLVA+ RSMLSD+R E SG SQ EA KL F
Sbjct: 546 HRTAWAKSGKNQDDAPKISVGGDLSTISGLVAA-RSMLSDDRRERSGSSQTEASKLTNRF 604
Query: 111 PGSFKDASEPLTRQDQKHHGH----APQKEEGRCSNQDPNLVGYGSKGYKIHYSGPLLVP 166
PGSFKD SE +QDQ+HH QKEEGR SN+D LVGYGS+G+KIHYSGPL
Sbjct: 605 PGSFKDFSESSIKQDQRHHVQGQVGTSQKEEGRSSNKDLVLVGYGSEGHKIHYSGPL--T 662
Query: 167 SSNTDQMLKDHDRQIQEAGXXXXXXXXXXXXXQAQGNDITNILFVSGR 214
SSN DQ+LKDHDRQIQEA QA+GN +TN LFVS R
Sbjct: 663 SSNMDQVLKDHDRQIQEAVRRARLDKAKIRRLQAEGNQVTNSLFVSKR 710
>Glyma06g44730.1
Length = 696
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 5 QGKTYSQSR--SEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLNHR 62
QG+ YS SR SE NPH V SG + P + S+ E+ + H +KR SHSGPL
Sbjct: 490 QGR-YSSSRNQSELSNPHRGTV-SGILVFPHKQSEK-EMDNNFSGHIYKRPSHSGPLVPG 546
Query: 63 NV----------APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWFPG 112
+V P +S +L SGLVASR ++ D + L + ++
Sbjct: 547 SVWAKGRKEVDDVPPVSNRVNLSKLSGLVASR-TLPEDQEVKPVHLHHRKPIEVRKSVES 605
Query: 113 SFKDASEPLTRQDQKHHGHAPQKEEGRCSNQDPNLVGYGSKGYKIHYSGPLLVPSSNTDQ 172
+ + SE RQDQK Q E R + + G S G KI+ SGPL+V SSN DQ
Sbjct: 606 T--NGSESRRRQDQKRIVDLNQIESRRVAAEKSTPGGRESMGNKIYLSGPLMVSSSNMDQ 663
Query: 173 MLKDHDRQIQE 183
MLKDHDR+IQE
Sbjct: 664 MLKDHDRKIQE 674
>Glyma13g37230.1
Length = 703
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 1 MQKRQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQA-VEVSRDSQVHQHKRASHSGPL 59
MQ+ Q S+SR+E FNPH E V SG + P + S+ E ++R HSGPL
Sbjct: 488 MQQGQRLPNSRSRNEFFNPHREPV-SGHLVFPQKQSEDHKETLNYFSGPLYQRPLHSGPL 546
Query: 60 -----------NHRNVAPKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLIT 108
P +S +LP SGLVASR S LS ++ E S+ P+
Sbjct: 547 VPGYGCEMVGREAGERRPHVSNKVNLPKLSGLVASRTSSLSGDQKENPVPSR---PRETI 603
Query: 109 WFPGSFK--DASEPLTRQDQKHHGHA--PQK-EEGRCSNQDPNLVGYGSKGYKI-HYSGP 162
S + + SE R D KHH P+K E G+ S + G+GS G I H SGP
Sbjct: 604 EVQISLESTNGSESRRRHDTKHHSQRIDPRKIENGKVSTETLIQDGHGSMGNNIYHLSGP 663
Query: 163 LLVPSSNTDQMLKDHDRQIQE 183
LLV S+N DQMLK+ DR+IQE
Sbjct: 664 LLVSSNNIDQMLKERDRKIQE 684
>Glyma12g12830.1
Length = 695
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 10 SQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLNHRNV----- 64
S+++SE NPH V SG + P + S+ E++ + H +KR SHSGPL +V
Sbjct: 495 SRNQSELSNPHRGSV-SGILVFPHKQSEK-EMNDNFSGHLYKRPSHSGPLVPGSVWAKGR 552
Query: 65 -----APKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLITWFPGSFKDASE 119
P +S +L SGLVASR S+++ S P + S + SE
Sbjct: 553 KEVDDVPPVSNRVNLSKLSGLVASR--TFSEDQEVKPVHSNHRKPIEVRKSVES-TNGSE 609
Query: 120 PLTRQDQKHHGHAPQKEEGRCSNQDPNLVGYGSKGYKIHYSGPLLVPSSNTDQMLKDHDR 179
R DQK Q E R + G S G KI+ SGPL+V SSN DQMLK+HDR
Sbjct: 610 SRRRHDQKQIVDLNQIESRRVPAEKSTPGGRESMGNKIYLSGPLMVSSSNMDQMLKEHDR 669
Query: 180 QIQE 183
+IQE
Sbjct: 670 KIQE 673
>Glyma12g33230.1
Length = 696
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 1 MQKRQGKTY--SQSRSEKFNPHPEEVASGFPIDPPRPSQA-VEVSRDSQVHQHKRASHSG 57
+ +QGK S+SR+E FNPH E A G + P + S+ E ++R HSG
Sbjct: 486 ISMQQGKRLPNSRSRNEFFNPH-REPAFGHLVFPQKQSEDHKETLNYFSGPLYQRPLHSG 544
Query: 58 PL----------NHRNVAPKISMGGDLPTSSGLVASRRSMLSDNRGETSGLSQAEAPKLI 107
PL P +S +LP SGLVASR S+ D + L E ++
Sbjct: 545 PLVPGYGYEMAGREAGGRPHVSSKVNLPKLSGLVASRTSLSGDQKENPVPLKPRETIQV- 603
Query: 108 TWFPGSFKDASEPLTRQDQKHHGHAP---QKEEGRCSNQDPNLVGYGSKGYKI-HYSGPL 163
+ SE R D+K H Q E G+ S + G+GS G I H SGPL
Sbjct: 604 ----QESTNGSESRRRHDKKRHSQTIDPRQIENGKFSTETLIQDGHGSMGNNIYHLSGPL 659
Query: 164 LVPSSNTDQMLKDHDRQIQE 183
L+ S+N DQMLK+ DR+IQE
Sbjct: 660 LLSSNNMDQMLKERDRKIQE 679
>Glyma12g28650.1
Length = 900
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 63/219 (28%)
Query: 4 RQGKTYSQSRSEKFNPHPEEVASGFPIDPPRPSQAVEVSRDSQVHQHKRASHSGPLNH-- 61
RQG+ S+ ++K+NP E+ GF +P + S+A++V SHSG H
Sbjct: 452 RQGQCNSKCITKKYNPE-EDGDYGFHREPAK-SRALDV-----------LSHSGQSVHPS 498
Query: 62 -----RNVAPKISMGGDLPTSSGLVASRRSMLSDNR----GETSGLSQAEAPKLITWFPG 112
RN+ K DL + SR+S L + G T+ LS+ F
Sbjct: 499 VYGSSRNMNLKEE---DLTSPDHGFRSRKSELRKQKSYWQGSTAKLSR---------FSN 546
Query: 113 SFKDASEPLTRQ--DQKHHGHAPQKEEG-RCSNQ----DPNLV----------------- 148
S +PL D + P+ + G RCS+Q L+
Sbjct: 547 SVAVQGDPLLDMSGDSSANSQWPEDQFGMRCSHQADGDSKQLLDGLKSSQKNDFHPIGKD 606
Query: 149 ---GYGSKGYKIHYSGPLLVPSSNTDQMLKDHDRQIQEA 184
GY +K ++H+SGPLL P N ++MLK+H+RQIQ+A
Sbjct: 607 RAKGYANKNARMHHSGPLLAPEDNLEEMLKEHERQIQQA 645