Miyakogusa Predicted Gene

Lj3g3v1403940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1403940.1 tr|K1QEF6|K1QEF6_CRAGI E3 ubiquitin-protein
ligase Hakai OS=Crassostrea gigas PE=4
SV=1,54.55,0.00000003,ZF_RING_1,Zinc finger, RING-type, conserved
site; E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED,NULL,CUFF.42545.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g17390.1                                                       223   4e-59
Glyma18g42230.1                                                       220   3e-58

>Glyma07g17390.1 
          Length = 439

 Score =  223 bits (568), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 104/112 (92%), Positives = 109/112 (97%)

Query: 1   MLQIRLSKTPASEGSAGVKVSPAETVTVACPDHLVLADLPVAKGIGAATAASLVKTLGRR 60
           MLQIRLSK PASEGSAG+K+SP ETVTVACPDHLVLADLPVAKGIGAAT ASLVKTLGRR
Sbjct: 1   MLQIRLSKAPASEGSAGLKLSPVETVTVACPDHLVLADLPVAKGIGAATVASLVKTLGRR 60

Query: 61  SRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQK 112
           SRRQLGERVHFCVRCDFPIA+YGRLSPCEHAFCLDCARSDS+CYLCD+RIQK
Sbjct: 61  SRRQLGERVHFCVRCDFPIAVYGRLSPCEHAFCLDCARSDSMCYLCDDRIQK 112


>Glyma18g42230.1 
          Length = 440

 Score =  220 bits (560), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 104/112 (92%), Positives = 107/112 (95%)

Query: 1   MLQIRLSKTPASEGSAGVKVSPAETVTVACPDHLVLADLPVAKGIGAATAASLVKTLGRR 60
           MLQIRLSK PASEGSAGVK+SP ETVTVACPDHLVLADLPVAKGIGAAT ASLVKTLGRR
Sbjct: 1   MLQIRLSKAPASEGSAGVKLSPVETVTVACPDHLVLADLPVAKGIGAATTASLVKTLGRR 60

Query: 61  SRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQK 112
           SRRQLGERVHFCVRCDFPIAIYGRL PCEHAFCLDCARSDS+CY CD+RIQK
Sbjct: 61  SRRQLGERVHFCVRCDFPIAIYGRLIPCEHAFCLDCARSDSMCYRCDDRIQK 112