Miyakogusa Predicted Gene

Lj3g3v1365900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1365900.1 Non Chatacterized Hit- tr|K4CPZ2|K4CPZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,31.78,9e-17,seg,NULL; DUF688,Protein of unknown function
DUF688,CUFF.42484.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g06590.1                                                       327   1e-89
Glyma01g31180.1                                                       258   4e-69
Glyma07g18880.1                                                       127   1e-29

>Glyma03g06590.1 
          Length = 254

 Score =  327 bits (838), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 187/281 (66%), Positives = 210/281 (74%), Gaps = 34/281 (12%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGA-VVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDM 59
           MD KRPRKLNLNAPLLSTRRLG+  VADTS SS S+  +QNTS+RVPFSWEKAPGKPK+ 
Sbjct: 1   MDRKRPRKLNLNAPLLSTRRLGSPNVADTSCSSYSVGPIQNTSERVPFSWEKAPGKPKET 60

Query: 60  ERSDSNQDGGTPRPRLPPGHQFPPKEAPEDD----LDSGDLAFHEKXXXXXXXXXXXXXX 115
           ERSD+ QDG TPR RLPPGH  PPKEA ++D     D+ D  F +               
Sbjct: 61  ERSDNTQDGNTPRLRLPPGHWLPPKEAAQEDGDGSCDNNDDFFSD--------------- 105

Query: 116 XXXXXXXVLSLSEALDIVQKKSEHIAQNENHKGLKLKLAESNGYQSPTYMINRFLPDATA 175
                  V SLSEALD VQKKSE+   N N  GL+LKLAESNGYQSPTYMINRFLPDATA
Sbjct: 106 ----AMDVFSLSEALDYVQKKSENAHSNTN-DGLRLKLAESNGYQSPTYMINRFLPDATA 160

Query: 176 LAASSALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFPWRMKHK 235
           LAASSALHF++N EEK  D C+Y +CY     RH    SYASSPKGCGLELLFPWRMKHK
Sbjct: 161 LAASSALHFSTNFEEKGCDTCNYQECY----TRH----SYASSPKGCGLELLFPWRMKHK 212

Query: 236 LCAMESPVLPCSTNLQKHHRSTKQKKHRSSAS-IPCTNVKE 275
           LC+M+SPVLPCSTNL KH R++KQKKHRSS + IPCTN+K+
Sbjct: 213 LCSMKSPVLPCSTNLHKHQRNSKQKKHRSSTTYIPCTNMKD 253


>Glyma01g31180.1 
          Length = 227

 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 156/244 (63%), Positives = 169/244 (69%), Gaps = 36/244 (14%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGA-VVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDM 59
           MD KRPRKLNLNAPLLSTRRLG+  VADTS SS S+  VQNTS+RVPFSWEKAPGKPK+ 
Sbjct: 1   MDRKRPRKLNLNAPLLSTRRLGSPNVADTSCSSYSVGAVQNTSERVPFSWEKAPGKPKET 60

Query: 60  ERSDSNQDGGTPRPRLPPGHQFPPKEAPEDDLDSGDLAFHEKXXXXXXXXXXXXXXXXXX 119
           ERSD+ QDGGT R RLPP H                                        
Sbjct: 61  ERSDNTQDGGTLRLRLPPRH--------------------------CCDGDDDKDDFFSD 94

Query: 120 XXXVLSLSEALDIVQKKSEHIAQNENHKGLKLKLAESNGYQSPTYMINRFLPDATALAAS 179
              VLSLSEALD VQKKSE+   N N  GL+LKLAESNGYQSPTYMINRFLPDATALAAS
Sbjct: 95  AMDVLSLSEALDYVQKKSENAHSNTN-DGLRLKLAESNGYQSPTYMINRFLPDATALAAS 153

Query: 180 SALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFPWRMKHKLCAM 239
           SALHF++N+EEK+ D CSY  CY     RH    SYASSPKGCGLELLFPWRMKHKLC++
Sbjct: 154 SALHFSTNLEEKDCDTCSYPGCY----TRH----SYASSPKGCGLELLFPWRMKHKLCSI 205

Query: 240 ESPV 243
           ESPV
Sbjct: 206 ESPV 209


>Glyma07g18880.1 
          Length = 196

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 88/120 (73%), Gaps = 9/120 (7%)

Query: 123 VLSLSEALDIVQKKSEHIAQNENHKGLKLKLAESNGYQSPTYMINRFLPDATALAASSAL 182
           VLSLSEA DI+Q+     A +++  GL+LKL+ESNG  SPTYMINRFLPDA AL ASS+ 
Sbjct: 86  VLSLSEASDIMQQ--SEAAHSDSKDGLRLKLSESNGGPSPTYMINRFLPDANALVASSSA 143

Query: 183 HFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFPWRMKHKLCAMESP 242
           HF++  + K  D CS+ + YL  S RH    S+A+SPKGCGLE LF W MK+KLCA++SP
Sbjct: 144 HFSN--DAKVCDNCSH-EGYLKGSTRH----SHATSPKGCGLEFLFSWLMKNKLCAIKSP 196



 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 51/63 (80%), Gaps = 4/63 (6%)

Query: 1  MDFKRPRKLNLNAPLLSTRRLG-AVVADTSYSSSSL-PTVQNTSDRVPFSWEKAPGKPKD 58
          MDFKRPRKLN NAPLLST+RLG + VAD S  S+SL  TV NTS  VPFSWE+APGKPK 
Sbjct: 1  MDFKRPRKLNFNAPLLSTKRLGFSGVADRSCLSNSLNSTVLNTS--VPFSWEQAPGKPKT 58

Query: 59 MER 61
          MER
Sbjct: 59 MER 61