Miyakogusa Predicted Gene
- Lj3g3v1340540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1340540.1 Non Chatacterized Hit- tr|I1LU79|I1LU79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.36,0,seg,NULL;
Cyclin,Cyclin PHO80-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL; Cyclin-like,Cycl,CUFF.42479.1
(231 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g32200.1 346 1e-95
Glyma13g38270.1 221 6e-58
Glyma07g13200.1 160 9e-40
Glyma03g25640.1 160 1e-39
Glyma09g38070.1 160 2e-39
Glyma18g48330.1 159 2e-39
Glyma03g31030.1 143 2e-34
Glyma19g33860.1 140 8e-34
Glyma03g03990.1 126 2e-29
Glyma01g32920.1 126 2e-29
Glyma19g42390.1 123 2e-28
Glyma02g30710.1 114 8e-26
Glyma16g09060.1 114 1e-25
Glyma03g31030.2 104 8e-23
>Glyma12g32200.1
Length = 232
Score = 346 bits (887), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/236 (75%), Positives = 190/236 (80%), Gaps = 13/236 (5%)
Query: 1 MLTVGEYSNNGRQLQQPETIETGPTELNLPRVLWVLSSMLEKLVARNENL-----QQLDG 55
MLT G+YSN+GR LQ ET ELNLPRVL VLSSMLEKLVARNE L Q+LDG
Sbjct: 1 MLTAGDYSNHGRPLQP----ETSLAELNLPRVLCVLSSMLEKLVARNEKLIDILSQELDG 56
Query: 56 -DGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS 114
+ G VRLG SLN FHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS
Sbjct: 57 LNSGSVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS 116
Query: 115 LVISLNVHRLLVTSVMVASKILDDEHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTV 174
LV SLNVHRLLVTSVMVASK+LDDEHYNNA+YARVGGVSN DFRV V
Sbjct: 117 LVTSLNVHRLLVTSVMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMV 176
Query: 175 TSRAFESYCFHLEKEMLVNGTGLKIERALTPKA---IENEISVGDNQSSSPPQIVE 227
+SR FESYCFHLEKEM+VNGTG+KIERALTPKA +E EIS+ D QS SPPQIVE
Sbjct: 177 SSRVFESYCFHLEKEMVVNGTGMKIERALTPKAMDDLETEISIEDKQSPSPPQIVE 232
>Glyma13g38270.1
Length = 141
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/145 (80%), Positives = 121/145 (83%), Gaps = 10/145 (6%)
Query: 1 MLTVGEYSNNGRQLQQPETIETGPTELNLPRVLWVLSSMLEKLVARNENL-----QQLDG 55
MLT GEYSN+ LQ ET TELNLPRVL +LSSMLEKLVARNE L QQLDG
Sbjct: 1 MLTAGEYSNHSWPLQP----ETSLTELNLPRVLCILSSMLEKLVARNEKLVDILSQQLDG 56
Query: 56 -DGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS 114
+ G VRLG SLN FHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS
Sbjct: 57 LNCGSVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS 116
Query: 115 LVISLNVHRLLVTSVMVASKILDDE 139
LV SLNVHRLLVTSVMVASK+LDDE
Sbjct: 117 LVTSLNVHRLLVTSVMVASKMLDDE 141
>Glyma07g13200.1
Length = 202
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 12/198 (6%)
Query: 29 LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
+P+V+ LSS+LE++ N++ QQ + ++ FHG+ P+ISI YLERI+K
Sbjct: 10 MPKVITFLSSLLERVAESNDHNQQ----------HQKISVFHGLTRPNISIHSYLERIFK 59
Query: 89 YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
Y NCSPSCFVV YVY+DR T R P + + NVHRLL+TSVMVA+K +DD +YNNA YA+
Sbjct: 60 YANCSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDMYYNNAYYAK 119
Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTP--K 206
VGG++ + F + VT F++YC +L++EML+ L + K
Sbjct: 120 VGGITKIEMNFLELDFLFGLGFHLNVTPGTFQAYCVNLQREMLLIQQPLNFADSTLNLGK 179
Query: 207 AIENEISVGDNQSSSPPQ 224
+++ + +++SS Q
Sbjct: 180 SLKAHLCFNEDESSHQKQ 197
>Glyma03g25640.1
Length = 209
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 105/164 (64%), Gaps = 7/164 (4%)
Query: 29 LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
+P+V+ L S+LE++ N++ Q L + ++ FHG+ P+ISI YLERI+K
Sbjct: 12 MPKVITFLCSLLERVAESNDHNQHLQQH-------QKISVFHGLTRPNISIQCYLERIFK 64
Query: 89 YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
Y NCSPSCFVV YVY+DR T R P + S NVHRLL+TSVMVA+K +DD YNNA YA+
Sbjct: 65 YANCSPSCFVVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMFYNNAHYAK 124
Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLV 192
VGG++ V F + VT F++YC HL++EML+
Sbjct: 125 VGGITKVEMNFLELDFLFGLGFHLNVTPGTFQAYCVHLQREMLL 168
>Glyma09g38070.1
Length = 188
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 108/165 (65%), Gaps = 9/165 (5%)
Query: 29 LPRVLWVLSSMLEKLVARNE-NLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIY 87
+P+++ LSS+L+++ N+ N QQL + + ++ FHG+ P+ISI YLERI+
Sbjct: 10 MPKLISFLSSLLKRVAESNDLNQQQL--------IHQKVSVFHGLTRPTISIQSYLERIF 61
Query: 88 KYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYA 147
KY NCSPSCF+V YVY+DR T R P + S NVHRLL+TSVMVA+K +DD +YNNA YA
Sbjct: 62 KYANCSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDLYYNNAYYA 121
Query: 148 RVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLV 192
+VGG++ + F + VT F++YC HL+ EML+
Sbjct: 122 KVGGITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEMLL 166
>Glyma18g48330.1
Length = 205
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 122/195 (62%), Gaps = 10/195 (5%)
Query: 29 LPRVLWVLSSMLEKLVARNE-NLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIY 87
+P+++ LSS+L+++ N+ N QQL L + ++ FHG+ P+ISI YLERI+
Sbjct: 10 MPKLISFLSSLLKRVAESNDLNQQQL--------LHQKVSVFHGLTRPTISIQSYLERIF 61
Query: 88 KYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYA 147
KY NCSPSCF+V YVY+DR T R P + NVHRLL+TSVMVA+K +DD +YNNA YA
Sbjct: 62 KYANCSPSCFIVAYVYLDRFTQRQPSLPINFFNVHRLLITSVMVAAKFMDDLYYNNAYYA 121
Query: 148 RVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALT-PK 206
+VGG++ + F + VT F++YC HL+ EML+ + +L+ K
Sbjct: 122 KVGGITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEMLLMQPLNFADSSLSLGK 181
Query: 207 AIENEISVGDNQSSS 221
+++ + +++SSS
Sbjct: 182 SLKAHLCYNEDESSS 196
>Glyma03g31030.1
Length = 217
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 27 LNLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERI 86
+ +PRVL +LSS+LE+ V RNE L + + + FHG+RAP++S+ KY++RI
Sbjct: 28 VGVPRVLSLLSSLLERSVQRNETLLEAK------HVKDVVTVFHGLRAPTLSVRKYIDRI 81
Query: 87 YKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVY 146
+KY+ CSPSCFVV ++Y+DR +H + + SLNVHRLL+TS+M+A+K +DD YNNA Y
Sbjct: 82 FKYSGCSPSCFVVAHIYVDRFI-QHTEIKLTSLNVHRLLITSIMLAAKFIDDAFYNNAYY 140
Query: 147 ARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTPK 206
A+VGGVS DFR+ + F YC LEKE ++IER +
Sbjct: 141 AKVGGVSTSELNRLEMSFLFGIDFRLQFSVDTFGRYCRQLEKEA---AEVVQIERPMQAC 197
Query: 207 AIENEISVGDN 217
I+ S D+
Sbjct: 198 RIKESWSNKDD 208
>Glyma19g33860.1
Length = 246
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 30 PRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKY 89
PRVL +LSS+LE+ V RNE + + + FHG+RAP++S+ KY++RI+KY
Sbjct: 60 PRVLSLLSSLLERSVQRNETSLEAK------HIKDVVTVFHGLRAPTLSVRKYIDRIFKY 113
Query: 90 TNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYARV 149
+ CSPSCFVV ++Y+DR +H + + SLNVHRLL+TS+M+A+K +DD YNNA YA+V
Sbjct: 114 SGCSPSCFVVAHIYVDRFI-QHTEIKLTSLNVHRLLITSIMLAAKFIDDAFYNNAYYAKV 172
Query: 150 GGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTPKAIE 209
GGVS DFR+ V F YC LEKE ++IER + I+
Sbjct: 173 GGVSTSELNRFEMSFLFGIDFRLQVGVETFGRYCRQLEKEA---AEVVQIERPMQACRIK 229
Query: 210 NEISVGDN 217
S D+
Sbjct: 230 ESWSNKDD 237
>Glyma03g03990.1
Length = 224
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 28 NLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIY 87
N P V+ VL+S++E+ +AR + + + + S N F P ++I YLERI+
Sbjct: 28 NTPLVINVLASLIERSMARTQRI--VKNCSNSLSKAISTNIFDCREIPDLTIQSYLERIF 85
Query: 88 KYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYA 147
+YT PS +VV YVYIDR +P + + NVHRLL+T++MVASK ++D ++ N+ +A
Sbjct: 86 RYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNFRNSYFA 145
Query: 148 RVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTPKA 207
RVGG++ F++ V FESYC HLE+E+ + G G IER L
Sbjct: 146 RVGGLTTNELNELELEFLFMMGFKLHVNVSVFESYCCHLEREVSIGG-GYHIERTL---R 201
Query: 208 IENEISVGDNQSSSPPQIVEIGL 230
EI + + QI + L
Sbjct: 202 CAEEIKAKNIEGRGYTQITRVML 224
>Glyma01g32920.1
Length = 224
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 28 NLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGK--SLNAFHGVRAPSISIPKYLER 85
N P V+ VL+S++E+ +AR + + + + L K S N F P ++I YLER
Sbjct: 28 NTPLVINVLASLIERSMARTQRIVKNCSNA----LSKVISTNIFDCREIPDMTIESYLER 83
Query: 86 IYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAV 145
I++YT PS +VV YVYIDR +P + + NVHRLL+T++MVASK ++D ++ N+
Sbjct: 84 IFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITTIMVASKYVEDMNFRNSY 143
Query: 146 YARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTP 205
+ARVGG+ F++ V FESYC HLE+E+ + G G IER L
Sbjct: 144 FARVGGLRTNELNELELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGG-GYHIERTL-- 200
Query: 206 KAIENEISVGDNQSSSPPQIVEIGL 230
EI + + QI + L
Sbjct: 201 -RCAEEIKAKNIEERGYTQITRVML 224
>Glyma19g42390.1
Length = 149
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 8/154 (5%)
Query: 30 PRVLWVLSSMLEKLVARNENLQ-QLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
P VL LSS E+ + +NE L PV + FHG +AP++S+ Y+ERI K
Sbjct: 2 PLVLLNLSSNWERSILKNEKLLLTTRKKNDPVTI------FHGSKAPNLSVTHYMERILK 55
Query: 89 YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
Y++CSPSCFV+ +Y+DR + L S N HRLL+TSVMVA K LDD++Y+NA YA+
Sbjct: 56 YSHCSPSCFVIAQIYMDRFFQKKGGYLT-SFNAHRLLITSVMVAVKFLDDKYYSNAYYAK 114
Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESY 182
VGGVS +FR+ VT+ F Y
Sbjct: 115 VGGVSTEEMNRMELEFLFNLEFRLFVTTELFLKY 148
>Glyma02g30710.1
Length = 98
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 10/107 (9%)
Query: 32 VLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKYTN 91
++ LSS+LE++ N++ QQ + ++ FHG+ P+ISI YLERI+KY N
Sbjct: 1 MIAFLSSLLERVAESNDHNQQ----------HQKISVFHGLTRPNISIQSYLERIFKYAN 50
Query: 92 CSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDD 138
CSPSCFVV YVY+DR T R P + + NVHRLL+TSVMVA+K +DD
Sbjct: 51 CSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDD 97
>Glyma16g09060.1
Length = 154
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 73/107 (68%), Gaps = 10/107 (9%)
Query: 32 VLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKYTN 91
++ LSS+LE++ N++ QQ + ++ FHG+ P+ISI YLERI+KY N
Sbjct: 1 MIAFLSSLLERVAESNDHNQQ----------HQKISVFHGLTRPNISIQSYLERIFKYAN 50
Query: 92 CSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDD 138
C+PSCFVV YVY+DR T R P + + NVHRLL+TSVMVA+K +DD
Sbjct: 51 CNPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDD 97
>Glyma03g31030.2
Length = 148
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 81/112 (72%), Gaps = 7/112 (6%)
Query: 27 LNLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERI 86
+ +PRVL +LSS+LE+ V RNE L + + + FHG+RAP++S+ KY++RI
Sbjct: 28 VGVPRVLSLLSSLLERSVQRNETLLEAK------HVKDVVTVFHGLRAPTLSVRKYIDRI 81
Query: 87 YKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDD 138
+KY+ CSPSCFVV ++Y+DR +H + + SLNVHRLL+TS+M+A+K +DD
Sbjct: 82 FKYSGCSPSCFVVAHIYVDRFI-QHTEIKLTSLNVHRLLITSIMLAAKFIDD 132