Miyakogusa Predicted Gene

Lj3g3v1204540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1204540.1 Non Chatacterized Hit- tr|I1LTX5|I1LTX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57768
PE,60.36,3e-16,seg,NULL,CUFF.42356.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g39120.1                                                        52   2e-07
Glyma12g31190.1                                                        50   1e-06
Glyma12g31190.2                                                        47   1e-05

>Glyma13g39120.1 
          Length = 368

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 34/66 (51%)

Query: 79  TAPPLHPAASHPRLYGAGDRXXXXXXXXXXXXXXXXXXXXXXNYGPVISREKVRDALLVL 138
           TAPPLHPA +  R YGA                         NYG VISREKVRDAL+VL
Sbjct: 289 TAPPLHPAVNVHRPYGAPLLQPFPPPNPPLSLAPAASPSSSPNYGSVISREKVRDALMVL 348

Query: 139 VQVSLF 144
           VQ + F
Sbjct: 349 VQDNQF 354


>Glyma12g31190.1 
          Length = 942

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 79  TAPPLHPAASHPRLYGAGDRXXXXXXXXXXXXXXXXXXXXXXNYGPVISREKVRDALLVL 138
           +APPLHPA +  R YGA                         +YGPVISREKVRDALLVL
Sbjct: 321 SAPPLHPAVNVQRPYGA--PLLQPFPPPNPPPSLAPAPSPSPSYGPVISREKVRDALLVL 378

Query: 139 VQVSLFA 145
           VQ+   A
Sbjct: 379 VQLGDMA 385


>Glyma12g31190.2 
          Length = 366

 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 79  TAPPLHPAASHPRLYGAGDRXXXXXXXXXXXXXXXXXXXXXXNYGPVISREKVRDALLVL 138
           +APPLHPA +  R YGA                          YGPVISREKVRDALLVL
Sbjct: 289 SAPPLHPAVNVQRPYGAPLLQPFPPPNPPPSLAPAPSPSPS--YGPVISREKVRDALLVL 346

Query: 139 VQVSLF 144
           VQ + F
Sbjct: 347 VQDNQF 352