Miyakogusa Predicted Gene

Lj3g3v1170190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1170190.1 Non Chatacterized Hit- tr|B9SCS5|B9SCS5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,60.26,1e-16,BZIP,Basic-leucine zipper domain; no description,NULL;
seg,NULL; SUBFAMILY NOT NAMED,NULL; CAMP-RESP,CUFF.42322.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g39340.1                                                        72   2e-13

>Glyma13g39340.1 
          Length = 310

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 44/78 (56%)

Query: 1   MLKNREXXXXXXXXXXXYTVXXXXXXXXXXXXXXXXXXILAEAERKRKQEILQRKHSTAA 60
           MLKNRE           YTV                   LAEAERKRKQEI QRKH+T A
Sbjct: 233 MLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLAEAERKRKQEISQRKHTTMA 292

Query: 61  QKRTEKLRAIKRPLSTTW 78
           QKRTE LRA++RPLS +W
Sbjct: 293 QKRTENLRAMRRPLSASW 310