Miyakogusa Predicted Gene

Lj3g3v1145920.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1145920.1 Non Chatacterized Hit- tr|A9NPB9|A9NPB9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,59.65,2e-19,Ribosomal_60s,Ribosomal protein 60S; seg,NULL; 60S
ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER,NULL,CUFF.42299.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g30800.1                                                        96   8e-21
Glyma13g39490.1                                                        95   1e-20
Glyma12g30800.3                                                        94   2e-20
Glyma19g37780.1                                                        91   2e-19
Glyma03g35080.1                                                        90   4e-19
Glyma10g07850.2                                                        89   1e-18
Glyma10g07850.1                                                        89   1e-18
Glyma0169s00200.2                                                      89   2e-18
Glyma0169s00200.1                                                      89   2e-18
Glyma12g30800.2                                                        86   9e-18

>Glyma12g30800.1 
          Length = 156

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 56/62 (90%)

Query: 1   MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
           MKV+AAYLLAVLGGN SPSA D+K+ILG+VG +AE +LI+LLLTEVKGKDF E+IASG E
Sbjct: 46  MKVVAAYLLAVLGGNPSPSADDIKHILGAVGAEAENELIELLLTEVKGKDFNELIASGSE 105

Query: 61  KL 62
           K+
Sbjct: 106 KM 107


>Glyma13g39490.1 
          Length = 114

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 56/62 (90%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN SPSA D+KNILG+VG +AE +LI+LLLTEVKGKDF E++ASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKNILGAVGAEAEHELIELLLTEVKGKDFNELLASGSE 60

Query: 61 KL 62
          K+
Sbjct: 61 KI 62


>Glyma12g30800.3 
          Length = 111

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 56/62 (90%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN SPSA D+K+ILG+VG +AE +LI+LLLTEVKGKDF E+IASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKHILGAVGAEAENELIELLLTEVKGKDFNELIASGSE 60

Query: 61 KL 62
          K+
Sbjct: 61 KM 62


>Glyma19g37780.1 
          Length = 143

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 53/62 (85%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKVIAAYLLAVLGGN++PSA DL+ ILGSVG DA +D I   L+EVKGKD AE+IA+GRE
Sbjct: 31 MKVIAAYLLAVLGGNAAPSADDLRTILGSVGADANDDNISNFLSEVKGKDIAELIAAGRE 90

Query: 61 KL 62
          KL
Sbjct: 91 KL 92


>Glyma03g35080.1 
          Length = 113

 Score = 90.1 bits (222), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 53/62 (85%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKVIAAYLLAVLGGN++PSA DL++ILGSVG DA +D I   L+EVKGKD  E+IASGRE
Sbjct: 1  MKVIAAYLLAVLGGNAAPSADDLRDILGSVGADANDDNISNFLSEVKGKDIVELIASGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma10g07850.2 
          Length = 114

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 55/62 (88%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN++PSA D+K ILGSVG++A+ED I+  L+EVKGKD  E+IA+G+E
Sbjct: 1  MKVVAAYLLAVLGGNNTPSADDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma10g07850.1 
          Length = 114

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 55/62 (88%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN++PSA D+K ILGSVG++A+ED I+  L+EVKGKD  E+IA+G+E
Sbjct: 1  MKVVAAYLLAVLGGNNTPSADDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma0169s00200.2 
          Length = 114

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN+SPSA  +K ILGSVGV+A+ED I+  L+EVKGKD  E+IA+GRE
Sbjct: 1  MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma0169s00200.1 
          Length = 114

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN+SPSA  +K ILGSVGV+A+ED I+  L+EVKGKD  E+IA+GRE
Sbjct: 1  MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGRE 60

Query: 61 KL 62
          KL
Sbjct: 61 KL 62


>Glyma12g30800.2 
          Length = 109

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%), Gaps = 2/62 (3%)

Query: 1  MKVIAAYLLAVLGGNSSPSALDLKNILGSVGVDAEEDLIQLLLTEVKGKDFAEIIASGRE 60
          MKV+AAYLLAVLGGN SPSA D+K+ILG+   +AE +LI+LLLTEVKGKDF E+IASG E
Sbjct: 1  MKVVAAYLLAVLGGNPSPSADDIKHILGA--AEAENELIELLLTEVKGKDFNELIASGSE 58

Query: 61 KL 62
          K+
Sbjct: 59 KM 60