Miyakogusa Predicted Gene

Lj3g3v1145890.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1145890.2 Non Chatacterized Hit- tr|F6HHH5|F6HHH5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,35.92,7e-16,
,CUFF.42295.2
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g19250.1                                                        47   7e-06

>Glyma11g19250.1 
          Length = 128

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 12  LQGHLNRMFDEEVVNSQFSTILWCPRNNRDRARDHAVQLIESYLADVDVILSELARHVDN 71
           L  H+  M DE +VN QF  +    +  R    D  ++L+ +Y      + S L+  +D 
Sbjct: 14  LYNHIRSMHDEGLVNQQFLQLQVLRQPFR---CDIILRLVTTYCNSCKDLFSSLSHQLDQ 70

Query: 72  SQVDFSMLASLAREVHDKSTSIGTEHMRLASLDVITACDDRRKLRFDHTLP 122
            +V++  L  LA + + +++SIG E +R A   +I AC+ + K       P
Sbjct: 71  ERVNYERLNDLALDFYARTSSIGAEGVRRACASLIEACERKDKNGMSDIFP 121