Miyakogusa Predicted Gene

Lj3g3v1113120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1113120.1 tr|B9HQM8|B9HQM8_POPTR Predicted protein
OS=Populus trichocarpa GN=MYB025 PE=4
SV=1,42.47,2e-18,seg,NULL,NODE_17314_length_1059_cov_31.740320.path1.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g39760.1                                                        71   7e-13
Glyma12g30140.1                                                        62   4e-10
Glyma12g08480.1                                                        59   4e-09
Glyma18g40790.1                                                        54   1e-07
Glyma11g19980.1                                                        51   8e-07

>Glyma13g39760.1 
          Length = 326

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 93/178 (52%), Gaps = 26/178 (14%)

Query: 30  YPAANNTSFTGLEPISVSPSNYFTSTNCISTTSMSLPFYNQNQEPSLVSASASPMQYQYH 89
           Y  A  +SFT LEPISV  SNY  +T    T S   PFY QNQEP  +++  SPMQY  +
Sbjct: 168 YMPAPTSSFTCLEPISVPSSNYTNTT----TASTLNPFY-QNQEP--LASIISPMQY--Y 218

Query: 90  PMTEN-LFMFXXXXXXXXXXXXXXXXXXXXIKQEEIMGFDQNLMMYNKSILSDVNQCGQE 148
           P+ ++ + +F                      ++E MGF QN M  +   ++++N  G E
Sbjct: 219 PIKDSSMLVFGSETSCSSSDGSCSQVSLGREVKQEDMGF-QNFMFGDHQNMNNINHDGGE 277

Query: 149 SPNGCLFQTQSQLDYDLEVIKQLVSSSNNGC------FNVDENKTEEKAMATMAMYNY 200
                 +  Q+ +DYDLEVI+ L+SS++N         +VDENKTEEK +     YNY
Sbjct: 278 E-----YTQQTAMDYDLEVIRNLISSNSNSSNSNNEYLSVDENKTEEKGV----YYNY 326


>Glyma12g30140.1 
          Length = 340

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 99/189 (52%), Gaps = 35/189 (18%)

Query: 33  ANNTSFTGLEPISVSPSNYFTSTNCISTTSMSLPFYNQNQEPSLVSASASPMQYQYHPMT 92
           A  +SFT LEPIS   SNY  +T    TTS SL FY Q+QEP LVS S      QY+P+T
Sbjct: 168 APTSSFTCLEPISAPSSNYTNTT----TTSNSLSFY-QHQEP-LVSVSPR----QYYPIT 217

Query: 93  EN--LFMFXXXXXXXXXXXXXXXXXXXXIKQEEIMGFDQNLMM---YNKSILSDVNQCGQ 147
           ++  L                       IKQE+ MGF QN M     N +   ++N  G 
Sbjct: 218 DSSMLVFGSETSCSSSDGSCSQVSLGREIKQED-MGF-QNFMFGDHQNMNKFMNINHDGG 275

Query: 148 E--------SPNGCLFQTQ-SQLDYDLEVIKQLV-----SSSNNGCFNVDENKTEEKAMA 193
           E         PNG +FQTQ + LDYDLEVIK L+     S+SNNG  +VDENKTEEK + 
Sbjct: 276 EEYVNQWTQRPNGYIFQTQQTALDYDLEVIKNLICSNSSSNSNNGYLSVDENKTEEKGV- 334

Query: 194 TMAMYNYYN 202
               YNY N
Sbjct: 335 ---YYNYCN 340


>Glyma12g08480.1 
          Length = 315

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 102/203 (50%), Gaps = 33/203 (16%)

Query: 4   RRQPY--QSSPQNPPLIIPSH--YRDFCSSYPAANNTSFTGLEPISVSPSNYFTSTNCIS 59
           R+QP    S+ QN P    S   Y ++C+  P    +  + +EP S+  SNY +++    
Sbjct: 127 RKQPSFPSSTLQNSPPSPSSDQLYGEYCTYTPLTTTSFTSNIEPFSLPSSNYASTS---- 182

Query: 60  TTSMSLPFYNQNQEPSLVSASASPMQYQYHPMTEN-LFMFXXXXXXXXXXXXXXXXXXXX 118
           TTS+S  FY QNQ+          MQ  YHP  +N + MF                    
Sbjct: 183 TTSVSHSFY-QNQDS---------MQQCYHPTRDNNMLMFGSEGSCSTSSDGSCTQGREI 232

Query: 119 IKQEEIMGF-----DQNLMMYNKSILSDVNQCGQESPNGCLFQTQ--SQLDYDLEVIKQL 171
           IKQEEI G+     D N M+ + + ++D    G++S  G  F     + LDYDLE IKQL
Sbjct: 233 IKQEEI-GYHSYNNDYNFMLNHSNNIND----GEKSCFGEWFSQTLLTPLDYDLEDIKQL 287

Query: 172 VSSSNNGCF--NVDENKTEEKAM 192
           +SSS++     NVDENKTEEKAM
Sbjct: 288 ISSSSSTASFNNVDENKTEEKAM 310


>Glyma18g40790.1 
          Length = 285

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 77/180 (42%), Gaps = 62/180 (34%)

Query: 38  FTGLEPISVSPSNYFTSTNCISTTSMSLPFYNQNQEPSLVSASASPMQYQYHPMTENLFM 97
           F  LEPIS   SN+  +     TTS SLPFY   + P L                     
Sbjct: 148 FISLEPISAPSSNHRNTI----TTSNSLPFYQHQERPCL--------------------- 182

Query: 98  FXXXXXXXXXXXXXXXXXXXXIKQEEIMGFDQNLMM---YNKSILSDVNQ-CGQE----- 148
                                IKQ++I GF QN M     N +   ++N   GQE     
Sbjct: 183 ------------------DREIKQQDI-GF-QNFMFGDHQNMNKFMNINHDGGQEYVNQW 222

Query: 149 --SPNGCLFQT-QSQLDYDLEVIKQLVSSSNNGC-----FNVDENKTEEKAMATMAMYNY 200
             +PNG +FQ  Q+ LDYDLEVI+ L+ S ++        +VDENKTEEK +  +   N+
Sbjct: 223 TQNPNGYIFQIEQTTLDYDLEVIRNLICSKSSSNSNNRYLSVDENKTEEKGVQILFKKNF 282


>Glyma11g19980.1 
          Length = 329

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 36/201 (17%)

Query: 13  QNPPLIIPSH--YRDFCSSYPAANNTSFTGLEPISVSPSNYFTSTNCISTTSMSLPFYNQ 70
           QNPPL   +H  Y ++C+  P    +  + +EP    PS+ + ST+ I TTS+S PFY Q
Sbjct: 139 QNPPLSPSAHQLYGEYCTYTPTTTTSFTSNIEPPFSLPSSNYASTSDI-TTSVSHPFY-Q 196

Query: 71  NQEPSLVSASASPMQYQYHPMTEN-------LFMFXXXXXXXXXXXXX-XXXXXXXIKQE 122
           NQ+          MQ  Y  M +N       + MF                     IKQE
Sbjct: 197 NQDS---------MQCYYPIMRDNSSNNNNNMLMFGSEGSCSTSSDGSCTNQGREIIKQE 247

Query: 123 EIMGF------DQNLMMYNKSILSDVNQCGQESPNGCLFQTQ---SQLDYDLEVIKQLVS 173
           E +G       + N M+ + + ++D    G++S     + +Q   + L YD+E IKQL+S
Sbjct: 248 ERIGCHSYNNNNDNFMLSHSNNIND----GEKSCAAGEWFSQTLLAPLGYDIEDIKQLIS 303

Query: 174 SSNNGCF--NVDENKTEEKAM 192
           SS++     NVDENKTEEKAM
Sbjct: 304 SSSSTTIFNNVDENKTEEKAM 324