Miyakogusa Predicted Gene
- Lj3g3v1101550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1101550.1 tr|A9RY74|A9RY74_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206826,32.5,6e-19,seg,NULL; DUF716,Protein of unknown
function DUF716, TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL
ME,NODE_26858_length_1180_cov_47.900002.path1.1
(196 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g35110.1 270 1e-72
Glyma09g34530.1 265 2e-71
Glyma16g17670.1 248 2e-66
Glyma20g26470.1 99 3e-21
Glyma07g38580.1 72 3e-13
Glyma07g38590.1 72 6e-13
Glyma11g13190.1 71 8e-13
Glyma12g05230.1 67 9e-12
Glyma03g02440.1 66 3e-11
Glyma10g42570.1 55 4e-08
Glyma13g28040.1 55 6e-08
Glyma08g39190.1 54 1e-07
Glyma20g24460.1 51 7e-07
Glyma17g02130.1 50 2e-06
>Glyma01g35110.1
Length = 278
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 150/196 (76%)
Query: 1 MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
MCIEL YS HLKIFVGGVLNP+HMNDFEHSGML MFFI GVV +L++KTRF+PLPEG
Sbjct: 67 MCIELLYSPHLKIFVGGVLNPAHMNDFEHSGMLLMFFIFGVVALLSQKTRFLPLPEGALC 126
Query: 61 XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
HSTTHKGLEG YHTLLV+L+GLCILSS+AGALLPTSFPVDLC G
Sbjct: 127 LLAASAFTAEYLLFYFHSTTHKGLEGYYHTLLVFLVGLCILSSIAGALLPTSFPVDLCNG 186
Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
IAI LQG+WFYQTAFVLYGPM+P GCK+R+NS+TCHS DSEVRGE
Sbjct: 187 IAIALQGLWFYQTAFVLYGPMMPSGCKLRENSVTCHSIDSEVRGELLANFQLFVAVLVVL 246
Query: 181 XGTLASYAYAASKYGN 196
GT+ASY +AAS+YG+
Sbjct: 247 VGTVASYGFAASRYGS 262
>Glyma09g34530.1
Length = 278
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 148/196 (75%)
Query: 1 MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
MCIEL YS HLKIFVGGVLNP+HMNDFEHSGML MFFI GVV + ++KTRF+PLPEG
Sbjct: 67 MCIELLYSPHLKIFVGGVLNPAHMNDFEHSGMLLMFFIFGVVALHSQKTRFLPLPEGALC 126
Query: 61 XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
HSTTHKGLEG YHTLLV+++GLCILSS+AGALLPTSFPVDLC G
Sbjct: 127 LLAASAFTAEYLLFYFHSTTHKGLEGYYHTLLVFVVGLCILSSIAGALLPTSFPVDLCNG 186
Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
IAI LQG+WFYQTAFVLYGPM+P GCK+R+NS+ CHS DSEVRGE
Sbjct: 187 IAIALQGLWFYQTAFVLYGPMMPSGCKLRENSVMCHSIDSEVRGELLANIQLFVAVLVVL 246
Query: 181 XGTLASYAYAASKYGN 196
GT+ASY +AAS+YGN
Sbjct: 247 VGTVASYGFAASRYGN 262
>Glyma16g17670.1
Length = 271
Score = 248 bits (634), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 139/196 (70%)
Query: 1 MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
+C+EL +T L+ FVGG LN ++ N+FEHSGML MF I GVV +L+EKTR +PLPE
Sbjct: 67 LCVELLLATRLRFFVGGALNTTYFNNFEHSGMLLMFLIFGVVALLSEKTRRLPLPENALC 126
Query: 61 XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
HSTTHKGLEG YH LL +LIGLCI+SSV+GALLPTSFPVDLC G
Sbjct: 127 LIAAAAFCAEYLLFYFHSTTHKGLEGYYHVLLAFLIGLCIISSVSGALLPTSFPVDLCNG 186
Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
IAI LQGIWFYQTAFVLYGPMLP GCK+RD++ITCH +SEVRGE
Sbjct: 187 IAIALQGIWFYQTAFVLYGPMLPSGCKLRDSNITCHPKESEVRGELFANAQLFVAVLAVL 246
Query: 181 XGTLASYAYAASKYGN 196
GT+ASY +AAS+YGN
Sbjct: 247 VGTVASYGFAASRYGN 262
>Glyma20g26470.1
Length = 135
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 58/83 (69%)
Query: 114 PVDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXX 173
PVDLC IAI LQ +WFYQTAFVLYGP++P GCK+R+NS+TC S DSEV GE
Sbjct: 37 PVDLCNDIAIALQSLWFYQTAFVLYGPVMPSGCKLRENSVTCDSIDSEVWGELLANIQLF 96
Query: 174 XXXXXXXXGTLASYAYAASKYGN 196
GT+ASY +AAS+YGN
Sbjct: 97 VAVLVVLVGTVASYGFAASRYGN 119
>Glyma07g38580.1
Length = 312
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 1 MCIELFY--STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGX 58
+ +ELF H + G + +H+++FEHS + FF+ I+ ++ R E
Sbjct: 63 VAMELFIGPERHQPLDPDGTIPSNHLHNFEHSSISITFFLYAACAIILDRARVQAQFE-L 121
Query: 59 XXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLC 118
HS H G EG YH LL L+ + + +++ G +LP SF V+
Sbjct: 122 TQLLGAIAFAQQLLLFHLHSADHMGPEGQYHLLLQILVFVSVSTALIGIVLPHSFLVNFV 181
Query: 119 KGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRG 164
+ ++I QG+W F+L+ P ++P GC + D + C S ++ R
Sbjct: 182 RSVSIFFQGLWLIVMGFMLWTPSLIPKGCYMNDEDGHMVVRCSSHEALHRA 232
>Glyma07g38590.1
Length = 289
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 17 GVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXX 76
G + +H+++FEHS + FF+ I+ ++ R V
Sbjct: 81 GTIPSNHLHNFEHSSISITFFLYAACAIILDRAR-VQTQFELTQLLGAIAFAQQLLLFHL 139
Query: 77 HSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFV 136
HS H G EG YH LL L+ + + +++ G +LP SF V+ + ++I QG+W F+
Sbjct: 140 HSADHMGPEGQYHLLLQNLVFVSVSTALIGIVLPHSFLVNFVRSVSIFFQGLWLIVMGFM 199
Query: 137 LYGP-MLPDGCKIRDNS----ITCHSDDSEVRG 164
L+ P ++P GC + D + C S ++ R
Sbjct: 200 LWTPSLIPKGCYMNDEDGHMVVRCSSHEALHRA 232
>Glyma11g13190.1
Length = 296
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 24 MNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG 83
+++FEH+ M + + TE T + L G HST H G
Sbjct: 85 LDNFEHATMFIHLALFAGFSLSTELTDSLDLFSGFVGILASSVFSQELFLLHFHSTDHVG 144
Query: 84 LEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP-ML 142
LEG YH LL ++ + ++SS+A + P +F L I++ QG WF F+L+ P +
Sbjct: 145 LEGHYHWLLQLIVLVSLVSSLAATIFPNNFNAALVLSISLIFQGCWFINMGFMLWIPSFV 204
Query: 143 PDGCKIR---------DNSITCHSDDSEVRGE 165
P+GC + ++TC S +++ R
Sbjct: 205 PEGCAVNLAKPSGHEIIGAVTCSSKEADFRAR 236
>Glyma12g05230.1
Length = 295
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 24 MNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG 83
+++FEH+ M + + TE T + L G HST H G
Sbjct: 84 LDNFEHATMFIHLALFAGFSLSTELTDSLDLFSGFVGILASSVFSQELFLLHFHSTDHVG 143
Query: 84 LEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP-ML 142
LEG YH LL ++ + +++++A + P +F L I++ QG WF F+L+ P +
Sbjct: 144 LEGHYHWLLQLIVLVSLVAALAATIFPNNFNAALVLSISVIFQGCWFINMGFMLWIPAFV 203
Query: 143 PDGCKIR---------DNSITCHSDDSEVRGE 165
P+GC + ++TC S +++ R
Sbjct: 204 PEGCVMNLAKASGHEIIGAVTCGSKEADFRAR 235
>Glyma03g02440.1
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 6/200 (3%)
Query: 1 MCIELFYS--THLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGX 58
+ +ELF S H G + H+++FEHS M F + ++ +K E
Sbjct: 61 IALELFISPARHQPFNPDGSIPSDHLHNFEHSSMAMSFLVYATFALVLDKICSKAQYE-L 119
Query: 59 XXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLC 118
HS H GLEG YH L LI + + +++ G P SF V
Sbjct: 120 THFLGAIAFAQQFLLIHLHSRDHMGLEGQYHYFLQLLILVSLSTTLMGIGYPNSFLVSFV 179
Query: 119 KGIAITLQGIWFYQTAFVLYGP-MLPDGC--KIRDNSITCHSDDSEVRGEXXXXXXXXXX 175
+ +I QG+W F+L+ P GC +R+ +TC+ DD+ R +
Sbjct: 180 RSFSIMFQGLWLMVMGFLLWTPGFQAKGCVTHLREYMVTCNDDDALHRAKSLVNILFSWL 239
Query: 176 XXXXXXGTLASYAYAASKYG 195
++ Y ++YG
Sbjct: 240 LILVTIFVMSFYLVLVTRYG 259
>Glyma10g42570.1
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 17 GVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXX 76
G + +H+++FEHS M F + + I+ ++ +
Sbjct: 79 GTIPTTHLHNFEHSSMAMAFLVYAIFAIVLDRIKCTKAQHELTHLLGAIAFTQQFLLIHL 138
Query: 77 HSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFV 136
HS H G EG YH LL LI + + +++ G P SF V + ++I QG+W F+
Sbjct: 139 HSRDHMGPEGQYHFLLQLLIIISLSTTLMGIGFPKSFLVCFVRSVSIIFQGVWLMVMGFL 198
Query: 137 LYGP-MLPDGCKIRDNSITCHSDDSEVR 163
L+ P GC + + SD+ VR
Sbjct: 199 LWTPGFQAKGCSMHLDE----SDEYVVR 222
>Glyma13g28040.1
Length = 308
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 22 SHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTH 81
+H+++FEHS + F + ++ ++ P HS H
Sbjct: 86 NHLHNFEHSSISLAFLLYAAFALVLDRLP-SPAKRALTQLLGSIAFAQQLLLFHLHSADH 144
Query: 82 KGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP- 140
G EG YH LL LI + + +++ G P SF V + ++I QG+W ++L+ P
Sbjct: 145 HGPEGQYHLLLQLLILISLSTTLLGIPFPKSFLVSFVRSLSIFFQGLWLVLMGYMLWTPG 204
Query: 141 MLPDGCKIRDNS----ITCHSDDSEVRG 164
++P GC I + + C DS R
Sbjct: 205 LIPKGCFINEEEGHQVVRCSDHDSLHRA 232
>Glyma08g39190.1
Length = 127
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 133 TAFVLYGPMLPDGCKIRDNSITCHSDDSE 161
TAFVLYGPM+P GCK+R+NS+TC S DSE
Sbjct: 49 TAFVLYGPMMPSGCKLRENSVTCDSIDSE 77
>Glyma20g24460.1
Length = 310
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 17 GVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXX 76
G + +H+++FEHS M F + + I+ ++ + +
Sbjct: 79 GTIPTTHLHNFEHSFMAMAFLVYAIFAIVLDR-KCIKAQHELTNLLGALAFTQQFLLIHL 137
Query: 77 HSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFV 136
HS H G EG YH LL LI + + +++ G P SF V + ++I QG+W F+
Sbjct: 138 HSRDHMGPEGQYHFLLQLLIIISLSTTLMGIGFPKSFLVCFVRSVSIIFQGVWLMVMGFL 197
Query: 137 LYGP-MLPDGCKIR-----DNSITCHSDDSEVRG 164
L+ P GC + + + C D+S R
Sbjct: 198 LWTPGFQAKGCFMHLEESDEYVVRCSDDESLHRA 231
>Glyma17g02130.1
Length = 219
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 78 STTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVL 137
S H G EG YH LL L+ + + +++ G P S V+ + ++I QG+W F+L
Sbjct: 93 SADHMGPEGRYHLLLQILVFVSLFTTLIGIGHPHSLLVNFVRSVSIFFQGLWLIVMGFML 152
Query: 138 YGP-MLPDGCKIRDNSITCHSDDSEVRG 164
+ P ++P GC + + C S ++ R
Sbjct: 153 WTPSLIPKGCYM---VVRCSSPEAPNRA 177