Miyakogusa Predicted Gene

Lj3g3v1063700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1063700.1 Non Chatacterized Hit- tr|I1M325|I1M325_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29705 PE,81.47,0,miaA:
tRNA dimethylallyltransferase,tRNA delta(2)-isopentenylpyrophosphate
transferase; IPPT,tRNA is,CUFF.42119.1
         (447 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g34680.1                                                       699   0.0  
Glyma10g03060.1                                                        93   5e-19
Glyma02g16750.1                                                        89   9e-18
Glyma19g33680.1                                                        86   6e-17
Glyma03g30850.1                                                        86   1e-16
Glyma11g19330.1                                                        84   3e-16
Glyma07g38620.1                                                        81   2e-15
Glyma18g53460.1                                                        80   3e-15
Glyma15g11040.1                                                        79   1e-14
Glyma17g02080.1                                                        78   2e-14
Glyma08g48020.1                                                        76   1e-13
Glyma10g41990.1                                                        67   3e-11
Glyma20g03130.1                                                        57   4e-08
Glyma20g25040.1                                                        53   8e-07

>Glyma13g34680.1 
          Length = 448

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/448 (75%), Positives = 371/448 (82%), Gaps = 1/448 (0%)

Query: 1   MINNGVCSLRTCLRLPERPLFRASPLSFSRRLRFXXXXXXXXXXXXXXXXSGPTGSGKSR 60
           MI+NGVC+LRTCLR P RPLFR  P  FS R RF                SGPTGSGKSR
Sbjct: 1   MISNGVCTLRTCLRFPARPLFREPPRLFSCRQRFLVTASETKKKEKVIVISGPTGSGKSR 60

Query: 61  LAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPSEDYSVGQFF 120
           LA+ELAKRLNGEIVSADSVQVY+GLD+GSAKPS ++RKEVPHHLVDILHPSEDYSVGQFF
Sbjct: 61  LALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPNERKEVPHHLVDILHPSEDYSVGQFF 120

Query: 121 EDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQVHLELAKLQRNED 180
           EDARQAT CI D GRVPIVVGGTGLYLRWFIYGKPDVPKAS E+ S+ + ELA+LQRN+D
Sbjct: 121 EDARQATGCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIVSEAYQELAELQRNDD 180

Query: 181 WDAAVQLVVKAGDPKAQFVASNDWYXXXXXXXXXXXXXXPPSAFRVPYESFTEQDGCSVA 240
           WD AVQLVVKAGDPKAQF+A NDWY              PPSAFRVPY+SF EQ    VA
Sbjct: 181 WDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGEYGVA 240

Query: 241 DGSEPSHMTTYGDAME-TDSSKLDYDFLCFFLSSNRLDLYKSLDYRCEDMLLGRHGILSE 299
           DGSE S M TYGDAME T+SS+LDY+F+CFFLSS+RLDLYKS+DYRCEDMLLGR GILSE
Sbjct: 241 DGSELSDMNTYGDAMEKTNSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILSE 300

Query: 300 AQWLLDIGLHPNSNSATRAIGYRQGMEYLLTCREQRGQSSAREFYKFLAEFQKASRNFAK 359
           AQWLLD GLHPNSNSAT+AIGYRQ MEYL  CREQ G SS  EFYKFL EFQKASRNFAK
Sbjct: 301 AQWLLDTGLHPNSNSATKAIGYRQAMEYLQRCREQGGHSSVEEFYKFLFEFQKASRNFAK 360

Query: 360 RQLTWFRNERIYHWLDASKPLETVLNFIHDAYNYGNGSLLVPEHLSMPRDISDRRVAAKL 419
           RQLTWFRNE IY WLDASKPLET+L+FIH AY+  NGS+LVPE L M RDIS+ R AA+L
Sbjct: 361 RQLTWFRNENIYQWLDASKPLETILDFIHGAYHDWNGSILVPEDLRMSRDISNHRQAAQL 420

Query: 420 KSYRSKNRHFVNGEDCSHILNWIRETQR 447
           K+YR++NRHFVNGEDC+HILNWIR+TQR
Sbjct: 421 KAYRTRNRHFVNGEDCTHILNWIRKTQR 448


>Glyma10g03060.1 
          Length = 315

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 67/100 (67%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TG+GKSRL+++LA     EI+++D +QVY+GLDI + K S +D++ VPHHL+ I++P+
Sbjct: 27  GATGAGKSRLSIDLATCFPSEIINSDKIQVYEGLDIVTNKISKEDQRGVPHHLLGIINPN 86

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
            D+S   F + + +    I    R+PI+VGG+  YL   I
Sbjct: 87  MDFSANDFCDTSSEIIASITRSERLPIIVGGSNSYLEALI 126


>Glyma02g16750.1 
          Length = 338

 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 67/100 (67%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TG+GKSRL+++LA     EI++AD +QV++GLDI + K S ++++ VPHHL+  + P+
Sbjct: 50  GATGAGKSRLSIDLATCFPSEIINADKIQVFEGLDIVTNKISKEEQRGVPHHLLGTIKPN 109

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
            D+SV  F + + +A   I    ++PIVVGG+  YL   +
Sbjct: 110 MDFSVNDFCDTSSEAIDSITRCQKLPIVVGGSNSYLEALM 149


>Glyma19g33680.1 
          Length = 284

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 68/100 (68%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TGSGK+RL+++LA     EI+++D +QVY GLD+ + K + ++++ +PHHL+   +P+
Sbjct: 42  GATGSGKTRLSIDLATCFPSEIINSDKMQVYSGLDVVTNKATKEEQRGIPHHLLGTQNPN 101

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
           ++++   F + A  A + I ++ +VPI+VGG+  Y+   +
Sbjct: 102 KEFTASDFCDMASHAIESITNREKVPIIVGGSNSYMEALV 141


>Glyma03g30850.1 
          Length = 296

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 65/100 (65%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TGSGK+RL+++LA     EI+++D +QVY GLD+ + K + ++++ VPHHL+   +P+
Sbjct: 43  GATGSGKTRLSIDLATCFPSEIINSDKIQVYSGLDVVTNKATKEEQRGVPHHLLGTQNPN 102

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
            +++   F   A  A + I  + +VPI+VGG+  Y+   +
Sbjct: 103 TEFTASDFCHMASHAIESITHREKVPIIVGGSNSYIEALV 142


>Glyma11g19330.1 
          Length = 470

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 64/101 (63%)

Query: 51  SGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           +GPT SGKS+LA++LA     E+++ADS+QVY+GLD+ + K  L  +  VPHHL+  + P
Sbjct: 28  TGPTASGKSKLAVDLASHFPVELINADSMQVYRGLDVLTNKLPLSHQNGVPHHLLGTVSP 87

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
           + +++   F + A      I  +  +P++VGGT  Y++  +
Sbjct: 88  NVEFTAKAFRDSAIPIIDDILARNHLPVIVGGTNYYIQALV 128


>Glyma07g38620.1 
          Length = 292

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 52  GPTGSGKSRLAMELAKRLN-GEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           G TG+GKS+LA+ELA +    EIV++D +QVY+GL+I + K + ++R+ VPHHL+  ++P
Sbjct: 2   GATGTGKSKLAIELATQFPPAEIVNSDKMQVYEGLNITTNKVTEEERRGVPHHLLGTVNP 61

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYL 147
           +  ++   F + A  A   I  +  +PI+ GG+  +L
Sbjct: 62  NTSFTAQDFCDQATLAVGSILGRDGLPIIAGGSNSFL 98


>Glyma18g53460.1 
          Length = 256

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDIL-HP 110
           G TG+GK++L++ L  +   E++++D +QVY+GLDI + K    +R  +PHHL+ I+  P
Sbjct: 2   GATGTGKTKLSINLGTQFPSEVINSDKIQVYKGLDIITNKVPESERNGIPHHLLGIIDDP 61

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYL 147
             D++V  F +    A   I + G +PI+VGG+  YL
Sbjct: 62  DYDFTVDDFCKHVLIALDLIIENGHLPIIVGGSNTYL 98


>Glyma15g11040.1 
          Length = 342

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)

Query: 52  GPTGSGKSRLAMELAKRLN-GEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           G TG+GK++LA+++AK     EIV++D +QVY+GLDI + K + ++   VPHHL+  + P
Sbjct: 50  GATGAGKTKLAIDVAKHFQPAEIVNSDKMQVYKGLDITTNKVTEEECGGVPHHLLGTVDP 109

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPD 156
             ++S   F   A  A   I +K  +PI+ GG+  YL   +   P+
Sbjct: 110 YINFSANDFCRYATLAIDSIVEKNGLPIIAGGSNSYLDALVNHYPE 155


>Glyma17g02080.1 
          Length = 311

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 65/101 (64%), Gaps = 1/101 (0%)

Query: 52  GPTGSGKSRLAMELAKRLN-GEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           G TG+GKS+LA++LA +    EIV++D +QVY+GLDI + K + ++R+ V HHL+  ++P
Sbjct: 22  GATGTGKSKLAIDLATQFPPAEIVNSDKMQVYEGLDITTNKVTEEERRGVLHHLLGTVNP 81

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
           + +++   F + A  A   I  +  +PI+ GG+  +L   +
Sbjct: 82  NTNFTAQDFCDHATLAVGSILGRDGLPIIAGGSNSFLDALV 122


>Glyma08g48020.1 
          Length = 246

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILH-P 110
           G T  GK++L++ L  +   EI+++D +Q+Y+GLDI + K    + + + HHL+ I++ P
Sbjct: 2   GATERGKTKLSINLDTQFPSEIINSDKIQIYKGLDIITNKVPESECRGISHHLIGIINDP 61

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYL 147
             D++V  F +    A   IF+ G +PI+VGG+  YL
Sbjct: 62  DYDFTVDDFCKHVLNALDLIFENGHLPIIVGGSNTYL 98


>Glyma10g41990.1 
          Length = 308

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 6/124 (4%)

Query: 52  GPTGSGKSRLAMELAKRL-NGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHL---VDI 107
           G TGSGKSRL+++LA      EI+++D +QVY+GLDI + K     R+ VPHHL   VD 
Sbjct: 28  GATGSGKSRLSIDLATLFPTSEIINSDKMQVYRGLDITTNKIPTAQRRGVPHHLLGDVDT 87

Query: 108 LHPSEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQ 167
            H  E +S   F   A      I  +  +PIVVGG+  ++   +    D P + + V  Q
Sbjct: 88  DHYGE-FSPADFRHHAADLIADITRRKNLPIVVGGSNSFVHALLVQNFD-PHSHSNVFQQ 145

Query: 168 VHLE 171
              E
Sbjct: 146 QQEE 149


>Glyma20g03130.1 
          Length = 113

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 33/55 (60%)

Query: 27 SFSRRLRFXXXXXXXXXXXXXXXXSGPTGSGKSRLAMELAKRLNGEIVSADSVQV 81
          + SRR RF                SGP   GKSRL +ELAKRLNGEIVSADS+QV
Sbjct: 1  NLSRRRRFLVTASKTKKKKKVIVISGPIDFGKSRLTLELAKRLNGEIVSADSIQV 55


>Glyma20g25040.1 
          Length = 94

 Score = 52.8 bits (125), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 52  GPTGSGKSRLAMELAKRL-NGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLV 105
           G TGSGKSRL+++LA    + EI+++D +QVY+GLDI + K     R+ VPH L+
Sbjct: 38  GATGSGKSRLSIDLATLFPSSEIINSDKMQVYRGLDITTNKIPPAQRRGVPHQLL 92