Miyakogusa Predicted Gene

Lj3g3v1061480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1061480.1 Non Chatacterized Hit- tr|I1LV74|I1LV74_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,68.12,4e-18,
,CUFF.42105.1
         (69 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35940.1                                                        96   1e-20
Glyma13g34440.1                                                        82   2e-16

>Glyma12g35940.1 
          Length = 65

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 4/69 (5%)

Query: 1  MTGEEVSGPAGPKLVRLIWFVGAAVICTMGTNKWLEYEKKTIIQQQQGAKAVAETPISSE 60
          MTGEE+SGPAGPKL+RL+ FVGAAVICT   NK+ EYE+ TII+QQQ    V ET  SSE
Sbjct: 1  MTGEEISGPAGPKLLRLVSFVGAAVICTAAINKYREYERNTIIKQQQ----VVETRNSSE 56

Query: 61 SVDMHKALK 69
          SV +HK LK
Sbjct: 57 SVAVHKTLK 65


>Glyma13g34440.1 
          Length = 67

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 2/69 (2%)

Query: 1  MTGEEVSGPAGPKLVRLIWFVGAAVICTMGTNKWLEYEKKTIIQQQQGAKAVAETPISSE 60
          MTGEE+SGPAGPKL+RL+ FVGAAVICT   NK+ EYE+ TII+QQQ  + V ET  SSE
Sbjct: 1  MTGEEISGPAGPKLLRLVSFVGAAVICTAAINKYREYERNTIIKQQQ--QQVVETHNSSE 58

Query: 61 SVDMHKALK 69
          SV + K LK
Sbjct: 59 SVAVPKTLK 67