Miyakogusa Predicted Gene

Lj3g3v1011010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1011010.1 tr|G7JFG9|G7JFG9_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g130200 PE=4
SV=1,61.96,3e-19,FBD,FBD,CUFF.41991.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g28060.1                                                        49   9e-07

>Glyma20g28060.1 
          Length = 421

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 9/94 (9%)

Query: 4   LQKTPKLEVLHIPMGFDPQICMDG--EDG--ILNSVPCCFKYSLKSFSISYFDGGEAEIQ 59
           L+K P LE+L     F   +C+ G  E+G  IL+ VP CF   LK   IS F G + E+Q
Sbjct: 313 LEKLPCLELL----VFQSGVCLSGNHEEGSWILDPVPSCFSRYLKLIRISQFCGTDGELQ 368

Query: 60  LLKFLLENATVLEEIRIFC-SKTLSSNLKKQAEI 92
           ++K LL++A +L ++ I C  +  S  L ++ ++
Sbjct: 369 VVKSLLKHAEILLQMDIICHHEKFSDGLARERDV 402