Miyakogusa Predicted Gene

Lj3g3v1010920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1010920.1 Non Chatacterized Hit- tr|I3SMY8|I3SMY8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.46,0,coiled-coil,NULL; Ligand-binding domain in the NO
signalling and Golgi transport,NO signalling/Golgi,CUFF.42177.1
         (186 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g16400.1                                                       368   e-102
Glyma06g42050.1                                                       367   e-102

>Glyma12g16400.1 
          Length = 186

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/186 (95%), Positives = 181/186 (97%)

Query: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M PVAPRSGDAIFAN+ERVNAELFTLTYGAIVRQLLTDLEE EEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEAEEVNKQLDQMGYNIGIRL 60

Query: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120
           +DEFLAKSNVSRC DFRETTDVIAKVGFKMFLGVTASVTNWDA+GTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCNDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEY 180
           VELPD CQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLK VPEEY
Sbjct: 121 VELPDNCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKHVPEEY 180

Query: 181 PYKDDE 186
           PYKDDE
Sbjct: 181 PYKDDE 186


>Glyma06g42050.1 
          Length = 186

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/186 (95%), Positives = 182/186 (97%)

Query: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M PVAPRSGDAIFAN+ERVNAELFTLTYGAIVRQLLTDLEEVEEVN+QLDQMGYNIGIRL
Sbjct: 1   MPPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNEQLDQMGYNIGIRL 60

Query: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120
           +DEFLAKSNVSRC DFRETTDVIAKVGFKMFLGVTASVTNWDA+GTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCNDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEY 180
           VELPD CQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLK VPEEY
Sbjct: 121 VELPDNCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKHVPEEY 180

Query: 181 PYKDDE 186
           PYKDDE
Sbjct: 181 PYKDDE 186