Miyakogusa Predicted Gene
- Lj3g3v0966220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0966220.1 Non Chatacterized Hit- tr|I1JE63|I1JE63_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6055
PE=,64.37,1e-18,seg,NULL; Endosulfine,Endosulphine,CUFF.41933.1
(80 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g06080.1 84 4e-17
Glyma02g12170.1 82 1e-16
Glyma15g40390.1 68 2e-12
Glyma08g18560.1 67 4e-12
Glyma08g18560.2 67 4e-12
Glyma08g18560.3 67 4e-12
Glyma15g15380.1 50 7e-07
Glyma09g04350.1 49 2e-06
>Glyma01g06080.1
Length = 160
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
Query: 1 MSEAKDVVDLK-------NSPEGEAISHDSGDDPKESDKDQNDXXXXXXXXXXXXAVMKK 53
MS+AK V DLK +SP E S S DD K+SD D++D AV KK
Sbjct: 1 MSDAK-VEDLKKEEEVGDDSPRNEVDSEKSADDLKDSDNDKSDGNPMPSSQQEEAAVKKK 59
Query: 54 YGGMLPKKPPLISKDHERAYFDSADWT 80
YGGMLPKKPPLISKDHERAYFDSADW
Sbjct: 60 YGGMLPKKPPLISKDHERAYFDSADWA 86
>Glyma02g12170.1
Length = 160
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Query: 1 MSEAKDVVDLK-------NSPEGEAISHDSGDDPKESDKDQNDXXXXXXXXXXXXAVMKK 53
MSEAK V DLK +SP+ E S S DD K+SD D++D AV KK
Sbjct: 1 MSEAK-VQDLKKEEEVADDSPKNEVDSGKSVDDLKDSDNDKSDGNAMPSSHQEEAAVKKK 59
Query: 54 YGGMLPKKPPLISKDHERAYFDSADWT 80
YGG+LPKKPPLISKDHERAYFDSADW
Sbjct: 60 YGGVLPKKPPLISKDHERAYFDSADWA 86
>Glyma15g40390.1
Length = 117
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 30/32 (93%)
Query: 49 AVMKKYGGMLPKKPPLISKDHERAYFDSADWT 80
AV KKYGGMLPKKPPLISKDHERAYFDSADW
Sbjct: 33 AVKKKYGGMLPKKPPLISKDHERAYFDSADWA 64
>Glyma08g18560.1
Length = 118
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 49 AVMKKYGGMLPKKPPLISKDHERAYFDSADWT 80
+V KKYGGMLPKKPPLISKDHERAYFDSADW
Sbjct: 34 SVKKKYGGMLPKKPPLISKDHERAYFDSADWA 65
>Glyma08g18560.2
Length = 117
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 49 AVMKKYGGMLPKKPPLISKDHERAYFDSADWT 80
+V KKYGGMLPKKPPLISKDHERAYFDSADW
Sbjct: 33 SVKKKYGGMLPKKPPLISKDHERAYFDSADWA 64
>Glyma08g18560.3
Length = 116
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 49 AVMKKYGGMLPKKPPLISKDHERAYFDSADWT 80
+V KKYGGMLPKKPPLISKDHERAYFDSADW
Sbjct: 33 SVKKKYGGMLPKKPPLISKDHERAYFDSADWA 64
>Glyma15g15380.1
Length = 90
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 53 KYGGMLPKKPPLISKDHERAYFDSADW 79
KYG + PKK PLISKD+ERA+FDSADW
Sbjct: 22 KYGRLAPKKKPLISKDNERAFFDSADW 48
>Glyma09g04350.1
Length = 93
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 53 KYGGMLPKKPPLISKDHERAYFDSADW 79
KYG + PKK PLISK++ERA+FDSADW
Sbjct: 22 KYGRLAPKKKPLISKNNERAFFDSADW 48