Miyakogusa Predicted Gene

Lj3g3v0965990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0965990.1 tr|G7I290|G7I290_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_1g007450 PE=4
SV=1,45.31,3e-19,seg,NULL,gene.g46601.t1.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g35240.1                                                       108   2e-24

>Glyma03g35240.1 
          Length = 231

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 81/127 (63%), Gaps = 19/127 (14%)

Query: 1   MCHWLHAYQYSEDWLLESFNISSEVFIKTXXXXXXXXXXXXEYYEKFLLELNGSIAVILK 60
           MCHW       ++  L SF++S++V                   +++L+ LNGSIA+I  
Sbjct: 122 MCHWRGHEGIPQEECLVSFDLSNQVL------------------DRYLVVLNGSIALISY 163

Query: 61  HADQT-FHISILGELGVKESWTKLFIVGPFPDIGLPIGVSQKGDIFFRKEAGELALFHLS 119
           + + T FHISILGE+GVKESWTKLFIVGP P +  PIGV + GDIFFR++  EL  F+LS
Sbjct: 164 YVETTIFHISILGEVGVKESWTKLFIVGPLPCVYCPIGVGKNGDIFFRRKDYELVWFNLS 223

Query: 120 NHMLEEI 126
            +M+EE+
Sbjct: 224 TNMIEEL 230