Miyakogusa Predicted Gene

Lj3g3v0950810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0950810.1 Non Chatacterized Hit- tr|I1MJB8|I1MJB8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21855 PE,79.37,0,no
description,NULL; rRNA_methylase,Putative rRNA methylase; seg,NULL;
S-adenosyl-L-methionine-depen,CUFF.41817.1
         (280 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g41430.1                                                       349   2e-96
Glyma08g17720.1                                                       146   2e-35
Glyma08g26250.1                                                       120   2e-27

>Glyma15g41430.1 
          Length = 285

 Score =  349 bits (895), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/286 (63%), Positives = 189/286 (66%), Gaps = 7/286 (2%)

Query: 1   MLSLRFWFSSFETHNXXXXXXXXXXXXTP------XXXXXXXXXXXGCFSVNPIKQNGVX 54
           MLSLR WFSS  THN             P                  C    PIKQNG+ 
Sbjct: 1   MLSLRLWFSSLATHNTLSCSSRRSLFLVPHQILNNNTLISNTSKILSCCYEKPIKQNGIF 60

Query: 55  XXXXXXXXXXXXXXXXXXXXXXXGLEDAFVSYLFGKKRATDVAHMVWKQVVQKGDTVIDA 114
                                  GLEDA VSYLFGKKRATD+AHMVWK VVQKGDTVIDA
Sbjct: 61  SVASDLQSSSFSSSFPKDSPFS-GLEDALVSYLFGKKRATDIAHMVWKHVVQKGDTVIDA 119

Query: 115 TCGNGFDTLAMLNLVADDSHNGYVYALDIQKDALNNTSLLLEESINADKKQLVKLFNTCH 174
           TCGNGFDTLAMLNLVADDSHNG VYALDIQKDAL+NTSLLLEES+N ++KQLVKLFN CH
Sbjct: 120 TCGNGFDTLAMLNLVADDSHNGCVYALDIQKDALDNTSLLLEESLNPNEKQLVKLFNICH 179

Query: 175 SKMEEIVPRNALVRLVAFNLGYLPGSDKEIIXXXXXXXXXXXXXXXXXXXXGLISIVVYV 234
           SKME  VPRNA  RLVAFNLGYLPG DKEII                    GLISIVVYV
Sbjct: 180 SKMENAVPRNASFRLVAFNLGYLPGGDKEIITRSKTTLLALEAAKRILMPGGLISIVVYV 239

Query: 235 GHPGGREELEAVETFAARLSVETWICCKLQMLNRPSAPIPIFLFRR 280
           GHPGGREELE VE+FA RL VE WICCKLQMLNRP APIPIFLF+R
Sbjct: 240 GHPGGREELEVVESFAGRLCVENWICCKLQMLNRPCAPIPIFLFKR 285


>Glyma08g17720.1 
          Length = 322

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 108/227 (47%), Gaps = 52/227 (22%)

Query: 1   MLSLRFWFSSFETHNXXXXXXXXXXXXTPXXXXXXXXXXXGCFSVNPIKQNGVXXXXXXX 60
           +LSLR WFS   THN             P            C     I+QN V       
Sbjct: 2   ILSLRLWFSYLSTHNTLSCSLRRSLFLVPPQILNNTSRNLSCSYEKLIQQNVVFLQLPVT 61

Query: 61  XXXXXXXXXXXXXXXXXGLEDAFVSYLFGKKRATDVAHMVW-----------------KQ 103
                                        +KRATD+AHM+                   Q
Sbjct: 62  SNLLLLLPSPNILPF--------------QKRATDIAHMIAPNPCSATVSFPHEQKDSDQ 107

Query: 104 VVQ---------------------KGDTVIDATCGNGFDTLAMLNLVADDSHNGYVYALD 142
           +++                     KGDTVIDATCGNGFDTLAMLNLV+DDSHNG VYALD
Sbjct: 108 ILEVSGPYNPPFGFAYCLHPCICLKGDTVIDATCGNGFDTLAMLNLVSDDSHNGCVYALD 167

Query: 143 IQKDALNNTSLLLEESINADKKQLVKLFNTCHSKMEEIVPRNALVRL 189
           IQKDAL+N SLLLEES+N ++KQLVKLFN CHSKME  VPRNA V +
Sbjct: 168 IQKDALDNISLLLEESLNPNEKQLVKLFNICHSKMENAVPRNASVSV 214


>Glyma08g26250.1 
          Length = 126

 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 79/119 (66%), Gaps = 20/119 (16%)

Query: 78  GLEDAFVSYLFGKKRATDVAHMVWKQVVQKGDTVIDATCGNGFDTLAMLNLVADDSHNGY 137
           GLED  VSYLFGKKRATD+AHM   +           TC       +MLNLV+DDSHNG 
Sbjct: 5   GLEDVLVSYLFGKKRATDIAHMHGVE-----------TCCPEMRH-SMLNLVSDDSHNGC 52

Query: 138 VYALDIQKDALNNTSLLLEESINADK--------KQLVKLFNTCHSKMEEIVPRNALVR 188
           VYALDI+KDAL+NTS LLEE +N ++        KQL KLFN CHSKME  VPRNA VR
Sbjct: 53  VYALDIKKDALDNTSPLLEELLNPNEIRTIIEQLKQLAKLFNFCHSKMENGVPRNASVR 111