Miyakogusa Predicted Gene

Lj3g3v0930310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0930310.1 Non Chatacterized Hit- tr|F6HLJ3|F6HLJ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.88,6e-19,seg,NULL; VQ,VQ,CUFF.41630.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42280.1                                                       177   2e-45
Glyma08g16790.1                                                       153   6e-38
Glyma02g29270.1                                                        79   1e-15
Glyma09g17140.1                                                        77   7e-15

>Glyma15g42280.1 
          Length = 153

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/148 (64%), Positives = 108/148 (72%), Gaps = 14/148 (9%)

Query: 1   MTKLHTCYPKSASSKLGIDRDSHVISKLKPKIRIIHIYAPEIIKTDAANFRELVQRLTGK 60
           MTKLHTCYP SASSKLGID+DSHVISK KPKIRIIH+YAPEIIKTDAANF+ELVQRLTGK
Sbjct: 1   MTKLHTCYPSSASSKLGIDKDSHVISKTKPKIRIIHVYAPEIIKTDAANFKELVQRLTGK 60

Query: 61  PEDEXXXXXXXXXXX----------XXMMIMQEDEKEFLSLQNGTEVKNEHQIQE-EDAM 109
           P++E                       +M+MQ+D  EFLSLQN T VKNE++ +E +D M
Sbjct: 61  PKEEEGRGKSKSKTALTKDPKDSHPKKVMVMQDD--EFLSLQNRTRVKNEYKEEEIQDDM 118

Query: 110 WRRPKSNEKFSDLFEGFSEFDGFMEVLS 137
           WR  KSNEKFS   +GF E DGFME LS
Sbjct: 119 WRS-KSNEKFSGFLDGFLELDGFMEELS 145


>Glyma08g16790.1 
          Length = 141

 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 97/134 (72%), Gaps = 12/134 (8%)

Query: 14  SKLGIDRDSHVISKLKPKIRIIHIYAPEIIKTDAANFRELVQRLTGKPEDEXXXXXXXXX 73
           +KLGI++DSH++SK KPKIRIIH+Y PEIIKTDAANFRELVQRLTGKP++E         
Sbjct: 2   TKLGINKDSHLVSKTKPKIRIIHVYTPEIIKTDAANFRELVQRLTGKPKEEGTGGSKSET 61

Query: 74  XXX---------XMMIMQEDEKEFLSLQNGTEVKNEHQIQE-EDAMWRRPKSNEKFSDLF 123
                         MIMQ DE+EFLSLQNGT +KNEH+ +E +D +WR  KSNEKFS   
Sbjct: 62  ALTKEPMDSHPKKAMIMQ-DEEEFLSLQNGTRLKNEHKEEEVQDDVWRS-KSNEKFSGFL 119

Query: 124 EGFSEFDGFMEVLS 137
           +GFSE DGFME LS
Sbjct: 120 DGFSELDGFMEELS 133


>Glyma02g29270.1 
          Length = 120

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 40/45 (88%)

Query: 20 RDSHVISKLKPKIRIIHIYAPEIIKTDAANFRELVQRLTGKPEDE 64
          +DSH+ISK KPKIRIIHI+APEIIKTD  NFRELVQ+LTG+P  E
Sbjct: 3  KDSHMISKTKPKIRIIHIFAPEIIKTDVENFRELVQKLTGRPSGE 47


>Glyma09g17140.1 
          Length = 110

 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 20 RDSHVISKLKPKIRIIHIYAPEIIKTDAANFRELVQRLTGKPEDE 64
          + SH+ISK KPKIRIIHI+APEIIKTD  NFRELVQ+LTGKP  E
Sbjct: 3  KGSHMISKTKPKIRIIHIFAPEIIKTDVENFRELVQKLTGKPSGE 47