Miyakogusa Predicted Gene

Lj3g3v0916990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0916990.1 Non Chatacterized Hit- tr|K3YGP0|K3YGP0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013408,45.93,1e-18,seg,NULL; bromo domain,Bromodomain;
CG13597-PA,NULL; FALZ-RELATED BROMODOMAIN-CONTAINING
PROTEINS,NU,CUFF.41613.1
         (384 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g15870.1                                                       352   3e-97
Glyma15g42440.1                                                       298   5e-81
Glyma15g07500.1                                                        67   4e-11
Glyma13g31800.1                                                        64   4e-10

>Glyma08g15870.1 
          Length = 689

 Score =  352 bits (903), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 215/386 (55%), Positives = 245/386 (63%), Gaps = 19/386 (4%)

Query: 2   VKSEPLVGVWELIKGHENISLFERRLENQEDSDRYKETVRQHVDLETIQLRLQKGSYSSC 61
           VKSEPLVGV ELIKGHE+ SLFERRL++Q+D+DRYK+ V+Q +DLETIQLRLQKG YSSC
Sbjct: 292 VKSEPLVGVLELIKGHEHSSLFERRLDSQQDTDRYKDLVKQPMDLETIQLRLQKGHYSSC 351

Query: 62  TSAFFRDLLLLFTNATVFFPEGSTESRAAQQLHHIVISEMRSHGXXXXXXXXXXXXXXXX 121
           TSAFFRDLLLLFTNATVFF   S ES+A +QLH +  +EM++HG                
Sbjct: 352 TSAFFRDLLLLFTNATVFFSHDSLESQAGRQLHRLATAEMKNHGQAQSDPIPRKNDSLPP 411

Query: 122 NAPPAKPDSLLSKHQASAPILVCRKRSSISAKASPATSGQKSDTQTIANDKKEKPPSDAK 181
           NAP AKPDSLLSK++AS PILVCRKRSS+S+K S AT GQK D Q + NDKKE+P SDAK
Sbjct: 412 NAPLAKPDSLLSKNKASGPILVCRKRSSMSSKPSSATFGQKGD-QPVFNDKKERPSSDAK 470

Query: 182 PPLKPSNSETDEEEAPKTKEKPVTTGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           PP+KPS+S+TDEEE PK KEKPV TGAR                                
Sbjct: 471 PPMKPSSSDTDEEELPKAKEKPV-TGARSLRRSNKNLNSNSSNNNNKKPSSISTPKAGSS 529

Query: 242 XXXXXXX---XXXXAEPVPEKKRNAAADFLKRIKRNTSVEALXXXXXXXXXXXXXXXXXX 298
                         AE   +KKR+AAADFLKRIKRNTS EA                   
Sbjct: 530 GNKPSETVKPEKSKAEGGADKKRSAAADFLKRIKRNTSAEASKGGSGGGSGGGGGGGGGS 589

Query: 299 XX----------VKEQKKPVNSAKGDKGKEKASRNNN-EGGPGSGDKRSKNTAEN---SK 344
                        KEQKK VN+ KGDKGKE+ASR+NN  GG GS DKR+    EN   SK
Sbjct: 590 SSSSKGGGGGNGAKEQKKMVNNGKGDKGKERASRHNNVGGGSGSADKRNNKNIENSSQSK 649

Query: 345 RSVGRPPKKAAETTPVSAKRGRESGA 370
           RSVGRPPKKAAET   SAKRGRE+ A
Sbjct: 650 RSVGRPPKKAAETNAGSAKRGRENSA 675


>Glyma15g42440.1 
          Length = 655

 Score =  298 bits (764), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 195/373 (52%), Positives = 218/373 (58%), Gaps = 56/373 (15%)

Query: 2   VKSEPLVGVWELIKGHENISLFERRLENQEDSDRYKETVRQHVDLETIQLRLQKGSYSSC 61
           VKSEPLVGV ELIKGHE+ SLFERRLE+Q D+DRYK+ V+Q +DLETIQLRLQKG YSSC
Sbjct: 321 VKSEPLVGVLELIKGHEHSSLFERRLESQ-DTDRYKDLVKQPMDLETIQLRLQKGHYSSC 379

Query: 62  TSAFFRDLLLLFTNATVFFPEGSTESRAAQQLHHIVISEMRSHGXXXXXXXXXXXXXXXX 121
           TSAFFRDLLLLFTNATVFF   + ES+  +QLH +  +EM++HG                
Sbjct: 380 TSAFFRDLLLLFTNATVFFSHDTLESQVGRQLHRLATTEMKNHGQAQSDPIPRKNDSLPP 439

Query: 122 NAPPAKPDSLLSKHQASAPILVCRKRSSISAKASPATSGQKSDTQTIANDKKEKPPSDAK 181
           NA  AKPDSL+SK++AS PILVCRKRSS+ AK S AT GQK                   
Sbjct: 440 NASLAKPDSLISKNKASGPILVCRKRSSMLAKPSSATFGQK------------------- 480

Query: 182 PPLKPSNSETDEEEAPKTKEKPVTTGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
                     DEEE PK KEKPV TGAR                                
Sbjct: 481 ----------DEEELPKAKEKPV-TGAR----------------SLRRSYKNLNNNNNKK 513

Query: 242 XXXXXXXXXXXAEPVPEKKRNAAADFLKRIKRNTSVEALXXXXXXXXXXXXXXXXXXXXV 301
                      AE  P+KKRNAAADFLKRIKRNTS EA                      
Sbjct: 514 PSSNSTPKTGKAEGGPDKKRNAAADFLKRIKRNTSAEA-----SKGGSGGSGGGGSGGGG 568

Query: 302 KEQKKPVNSAKGDKGKEKASRNNN-EGGPGSGDKRSKNTAEN---SKRSVGRPPKKAAET 357
            +QKK VN+ KGDKGKE+ASR+NN  GG GSGDKR+    EN   SKRSVGRPPKKAAET
Sbjct: 569 GKQKKMVNNGKGDKGKERASRHNNVGGGSGSGDKRNSKNVENNSQSKRSVGRPPKKAAET 628

Query: 358 TPVSAKRGRESGA 370
              SAKRGRES A
Sbjct: 629 NAGSAKRGRESSA 641


>Glyma15g07500.1 
          Length = 460

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 1   MVKSEPLVGVWELIKGHENISLFERRLENQEDSDRYKETVRQHVDLETIQLRLQKGSYSS 60
           + KS  ++ + + I   +  S F+RRL++Q+   RYK+ + QH+D +TI+ R+   +  S
Sbjct: 252 VAKSCDMMEILDFIFETKGASAFQRRLDSQKRG-RYKKMILQHMDFDTIRSRISSQTIKS 310

Query: 61  CTSAFFRDLLLLFTNATVFFPEGSTESRAAQQLHHIVISEMR 102
            +   FRDLLLL  NA VF+ + + E + A  L  IV  +MR
Sbjct: 311 -SVELFRDLLLLTNNALVFYSKSTREYKTALLLRGIVTKKMR 351


>Glyma13g31800.1 
          Length = 455

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 23  FERRLENQEDSDRYKETVRQHVDLETIQLRLQKGSYSSCTSAFFRDLLLLFTNATVFFPE 82
           F RRL++Q+   RYK+ +RQH+D +TI+ R+   +  S     FRDLLLL  NA VF+ +
Sbjct: 279 FRRRLDSQKRG-RYKKMIRQHMDFDTIRSRISSQTIKSSVE-LFRDLLLLTNNALVFYSK 336

Query: 83  GSTESRAAQQLHHIVISEMR 102
            + E +    L  IV  +M+
Sbjct: 337 STREYKTVLLLRGIVTKKMK 356