Miyakogusa Predicted Gene

Lj3g3v0883700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0883700.1 tr|G7J066|G7J066_MEDTR Sister chromatid cohesion
1 protein OS=Medicago truncatula GN=MTR_3g005770
PE,31.82,0.003,seg,NULL; Rad21_Rec8_N,Rad21/Rec8-like protein,
N-terminal; COHESIN SUBUNIT RAD21,NULL; SCC1 / RAD21,CUFF.41590.1
         (439 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g16090.1                                                       211   2e-54
Glyma09g38310.1                                                       155   9e-38
Glyma18g48020.1                                                       155   1e-37
Glyma14g06210.1                                                        70   4e-12
Glyma02g43130.1                                                        64   3e-10
Glyma19g25030.1                                                        59   9e-09

>Glyma08g16090.1 
          Length = 629

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 111/135 (82%), Gaps = 2/135 (1%)

Query: 1   MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVQHIMDPGVPIALRMSGHLL 60
           MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTV  IMDPGVPIALRMSGHLL
Sbjct: 1   MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVLRIMDPGVPIALRMSGHLL 60

Query: 61  LGVVRIYSKKVDYLFHDCNVVLTGLSKAFAAIQLTLPEDARQAPVQSITLPENFNLDALN 120
           LGVVRIYSKKV+YL  DC   LTGL KAFA +Q   PE+AR AP QS+TLP  F+LDA N
Sbjct: 61  LGVVRIYSKKVEYLHQDCKDALTGLHKAFATLQFAQPEEARPAPFQSVTLPGTFDLDAQN 120

Query: 121 LGDDIDHNWVEDVHR 135
           + D I+  ++ D  R
Sbjct: 121 IDDQIE--YISDTSR 133



 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 80/135 (59%), Gaps = 20/135 (14%)

Query: 306 NSPTQATQAMPIEVLRDANNDYNIENPPVYQDLGDNDT-EPNKDLDQTMNERDPIPEMID 364
           +SP+Q TQ   +EV RDANND N+ENP V+ +  DND  EPN  LDQT NE+D +P M+ 
Sbjct: 245 HSPSQGTQ---VEVGRDANNDDNVENPQVFTNREDNDVAEPNGGLDQTTNEKDHVPGMMR 301

Query: 365 DLGPEGISGPPPLHFGPSTPATSQGGTQDAHVFVEHNSPNLVLRSSXXXXXXXXXXXXRG 424
           DL    +S P P+   P TP TSQG         E N P+ V+R S            RG
Sbjct: 302 DLNFR-MSVPSPM--NPLTPPTSQG---------EINVPDFVVRES----PPIQQPQRRG 345

Query: 425 RKRKQLFDEPIVLSN 439
           RKRKQ FDEPIVL+N
Sbjct: 346 RKRKQFFDEPIVLTN 360


>Glyma09g38310.1 
          Length = 1071

 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 3/147 (2%)

Query: 1   MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVQHIMDPGVPIALRMSGHLL 60
           MFYSQ  LA+KGPL T+WIAAHL+ +L+K+    TDI  +V  I+ P +PIALR+S HLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEIPIALRLSSHLL 60

Query: 61  LGVVRIYSKKVDYLFHDCNVVLTGLSKAFAAIQLTLPEDARQAPVQSITLPENFNLDALN 120
           LGVVRIYS+KV+YLF DC+  L  + +AF +  + LP +   AP  SITLPE F+LD   
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121 LGDD--IDHNWVEDVHRRSQEDITLED 145
           L D+  +  N+V D H  ++E ITL+D
Sbjct: 121 LPDNDILQGNYV-DHHVSTREQITLQD 146


>Glyma18g48020.1 
          Length = 1153

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 3/147 (2%)

Query: 1   MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVQHIMDPGVPIALRMSGHLL 60
           MFYSQ  LA+KGPL T+WIAAHL+ +L+K+    TDI  +V  I+ P VPIALR+S HLL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 60

Query: 61  LGVVRIYSKKVDYLFHDCNVVLTGLSKAFAAIQLTLPEDARQAPVQSITLPENFNLDALN 120
           LGVVRIYS+KV+YLF DC+  L  + +AF +  + LP +   AP  SITLPE F+LD   
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121 LGDD--IDHNWVEDVHRRSQEDITLED 145
           L D+  +  N+V D H  ++E ITL+D
Sbjct: 121 LPDNDILQGNYV-DHHVSTREQITLQD 146


>Glyma14g06210.1 
          Length = 573

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 50/83 (60%)

Query: 7  FLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVQHIMDPGVPIALRMSGHLLLGVVRI 66
           LARK PL  +W+AA +  ++ +      +I    + I++P +P+ALR+SG L+ GVV +
Sbjct: 1  LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSIPMALRLSGILMGGVVIV 60

Query: 67 YSKKVDYLFHDCNVVLTGLSKAF 89
          Y +KV  L+ D    L  +++A+
Sbjct: 61 YERKVKLLYEDVTRFLVEINEAW 83


>Glyma02g43130.1 
          Length = 681

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 44/69 (63%)

Query: 7  FLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVQHIMDPGVPIALRMSGHLLLGVVRI 66
           LARK PL  +W+AA +  ++ +      +I +  + I++P +P+ALR+SG L+ GVV +
Sbjct: 1  LLARKAPLGQIWMAATMHAKINRRKLDKLNIINICEEILNPSIPMALRLSGILMGGVVIV 60

Query: 67 YSKKVDYLF 75
          Y +KV  L+
Sbjct: 61 YERKVKLLY 69


>Glyma19g25030.1 
          Length = 266

 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 14  LSTVWIAAHLQHRLKKSHYTATDIPSTV---QHIMDPGVPIALRMSGHLLLGVVRIYSKK 70
           L+ ++I   ++ RL  S+  A    S +     I+     ++ R+ G+LL+G++RI+SKK
Sbjct: 2   LTVLFIICLVESRLILSYCFAIFFLSFLPSEDKILQEMDVVSYRVLGYLLVGIIRIFSKK 61

Query: 71  VDYLFHDCNVVLTGLSKAFAAIQLTLPEDARQAPVQSITLPENFNLDALNLGDDIDHNWV 130
           V+Y+  DCN VL  ++K     +  +  +  + PV   T+P+   LD   L D++++  V
Sbjct: 62  VEYVLEDCNEVLIKINKFVVNKEGIVRVETLRMPV---TIPDRLELDVFEL-DELEN--V 115

Query: 131 EDVHRRSQEDITLEDR 146
           +  H    E+ITL D+
Sbjct: 116 DRGHTAPPEEITLRDK 131