Miyakogusa Predicted Gene

Lj3g3v0860600.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0860600.3 tr|Q7XLQ4|Q7XLQ4_ORYSJ OSJNBa0044M19.2 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0044M19.2
PE,36.76,3e-18,KH_1,K Homology domain, type 1; KH_TYPE_1,K Homology
domain, type 1; Eukaryotic type KH-domain (KH-d,CUFF.41586.3
         (783 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00390.1                                                       811   0.0  
Glyma18g00390.2                                                       297   4e-80
Glyma11g36470.1                                                       292   1e-78
Glyma11g36480.1                                                       268   2e-71
Glyma18g00390.3                                                       246   8e-65
Glyma09g36510.1                                                       100   9e-21
Glyma12g00850.1                                                        99   1e-20

>Glyma18g00390.1 
          Length = 779

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/788 (61%), Positives = 536/788 (68%), Gaps = 71/788 (9%)

Query: 1   MIAEFDPTSALEPHKMSRASSAALTSGQKPSKFAAKSGFVIPKNKLSGSLVPVFRGAKKH 60
           M AE D T A EPHKMS         GQK S F+AKSGFVIPKNKLSGSLVP+FRGAKKH
Sbjct: 1   MSAEIDSTCAPEPHKMS---------GQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKKH 51

Query: 61  GVTGGAVNEESLKQIERVTKWGPDLTQDASVKRAKAMALQIRVDQITKQLESEELQIGDT 120
           GVT GA NEES KQIER +KWGPDLTQDA+V+R K +ALQIRVDQITKQLESE+L++GDT
Sbjct: 52  GVTVGATNEESSKQIERKSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDT 111

Query: 121 QNLPIASENPNQSTSGSDMNSKKSEMLELEKREAIGEILKLDPSYKPPPGFKPLLKEASI 180
           QNL     NP+QS SG  + SKKSEMLELEKREAIGEILKLDPSYKPP GFKPLLKEASI
Sbjct: 112 QNL-----NPDQSKSGPRITSKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASI 166

Query: 181 PLPVQEHPGHKFIGLIYGPEGDTQKRLEKETGAKIKIHGTRADTGDKGEIKPGTDIQCSY 240
           PLPVQE+PG+ F+GLIYG E     +L+ ETGAKIKIHG +ADTG+KGEIKPGTDIQC+Y
Sbjct: 167 PLPVQEYPGYNFVGLIYGLE---VSKLQSETGAKIKIHGIKADTGEKGEIKPGTDIQCNY 223

Query: 241 QEMHVNISADSFDKVDAAVSIIELLLSSITGNSAAVSTP-VSVSGDSTNVPSQSQDAPPS 299
           +EMHVN+SADSF+KVDAA+SIIELL++S+ GN AA STP +SVS  STNV SQS + PPS
Sbjct: 224 KEMHVNLSADSFEKVDAAMSIIELLVTSVIGNLAAGSTPSISVSRYSTNVLSQSHECPPS 283

Query: 300 NAVSLPSENQAVLQPAAVTQMHGDHFQYPGPWFSVAPSHTPLGAASGSSVPPYPPG--RT 357
           +A SL  ENQAVLQP AVTQMHGD+FQY  PWFSV PSH+P+ A+SGS   P P G  RT
Sbjct: 284 HADSLSLENQAVLQPVAVTQMHGDNFQYSSPWFSVVPSHSPVFASSGSVALPNPLGLART 343

Query: 358 PHFPSQTMTPSNMVSTFGAQXXXXXXXXXXXXXXXNHHVSMQALPPRPMLQHSHMNQASP 417
           PHFPS T   SNM S FGAQ               N HVS+QA PPR +LQ+SHM Q SP
Sbjct: 344 PHFPSHT---SNMTSPFGAQPGPAGFQPIIP----NQHVSVQAPPPRQVLQYSHMTQTSP 396

Query: 418 LGHIVPPRNPSSVPVQNFSAPTNASVSFQVTLSQPTPIGHLQTPVSSMPQPMSGISPSPM 477
           LGHI PPRNP    VQN   PTNAS+SF VTLSQPTPIG  QT VSSM  PMSGIS S +
Sbjct: 397 LGHIGPPRNP----VQNLLTPTNASLSFPVTLSQPTPIGQHQTSVSSMHLPMSGISSS-I 451

Query: 478 PNQPLTPLGVSPRQSGGPVSL------SNLGXXXXXXXXXXXXXSLGQ------------ 519
           PNQ LT LGVS  Q+  PV++      SN+              SL Q            
Sbjct: 452 PNQSLTHLGVSSGQNEAPVTVKMSVGPSNMVPMASPVVPPARPVSLHQQPDVAFKPPQSN 511

Query: 520 ------SATFSQHQXXXX--XXXXXXXXXXXXXXTYSSRPVSFPSPRMSPSNPLPQQSGT 571
                 SATF  HQ                     +   PVSFPSP +SPS PLPQQ+G 
Sbjct: 512 MSMMPRSATFPPHQVGISPGQPSSLRPMPVPISANHLLGPVSFPSPGISPSLPLPQQAGI 571

Query: 572 PNSFSGVTPYQAHATPLVLTTSNSGNFTFQSQRPNADYSQVASRPNSQATAEGGIQEXXX 631
           PN   GV PY  H  P VL TS SGNFTFQS  PNADY QV S PNSQ+   G  QE   
Sbjct: 572 PNLAFGVAPYHTHVKPPVLGTSKSGNFTFQSHLPNADYGQVYSGPNSQS---GATQEPPS 628

Query: 632 XXXXXXXXXXXXDQRLQMFPRTQSPSQVDQTQAHLFNLPFGGRSGSVSI---PPRHTTFP 688
                       DQ  Q+FPRTQ P QVDQ  A      FGGRSGS+S    PPRH  FP
Sbjct: 629 GPRPPPFGFAVPDQPRQIFPRTQFPGQVDQAVA------FGGRSGSISNSIPPPRHGVFP 682

Query: 689 YAGQPGPRSPAPQMGMQNFISAPQRPNFPTPGVQGGMHIRQNYP-QRAWPDIPMPLNQKF 747
           YAGQP PRS A QMGM+NFISAPQ PN  + G Q GM IR++Y  Q AW DI MPLNQKF
Sbjct: 683 YAGQPAPRSSAAQMGMKNFISAPQIPNLTSAGSQRGMPIRKSYATQMAWADISMPLNQKF 742

Query: 748 GNNHPMAS 755
            +N PMAS
Sbjct: 743 VSNPPMAS 750


>Glyma18g00390.2 
          Length = 427

 Score =  297 bits (760), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 207/393 (52%), Positives = 228/393 (58%), Gaps = 44/393 (11%)

Query: 393 NHHVSMQALPPRPMLQHSHMNQASPLGHIVPPRNPSSVPVQNFSAPTNASVSFQVTLSQP 452
           N HVS+QA PPR +LQ+SHM Q SPLGHI PPRNP    VQN   PTNAS+SF VTLSQP
Sbjct: 20  NQHVSVQAPPPRQVLQYSHMTQTSPLGHIGPPRNP----VQNLLTPTNASLSFPVTLSQP 75

Query: 453 TPIGHLQTPVSSMPQPMSGISPSPMPNQPLTPLGVSPRQSGGPVSL------SNLGXXXX 506
           TPIG  QT VSSM  PMSGIS S +PNQ LT LGVS  Q+  PV++      SN+     
Sbjct: 76  TPIGQHQTSVSSMHLPMSGISSS-IPNQSLTHLGVSSGQNEAPVTVKMSVGPSNMVPMAS 134

Query: 507 XXXXXXXXXSLGQ------------------SATFSQHQXXXXXXXXXXXXXXXXXXTYS 548
                    SL Q                  SATF  HQ                  + +
Sbjct: 135 PVVPPARPVSLHQQPDVAFKPPQSNMSMMPRSATFPPHQVGISPGQPSSLRPMPVPISAN 194

Query: 549 SR--PVSFPSPRMSPSNPLPQQSGTPNSFSGVTPYQAHATPLVLTTSNSGNFTFQSQRPN 606
               PVSFPSP +SPS PLPQQ+G PN   GV PY  H  P VL TS SGNFTFQS  PN
Sbjct: 195 HLLGPVSFPSPGISPSLPLPQQAGIPNLAFGVAPYHTHVKPPVLGTSKSGNFTFQSHLPN 254

Query: 607 ADYSQVASRPNSQATAEGGIQEXXXXXXXXXXXXXXXDQRLQMFPRTQSPSQVDQTQAHL 666
           ADY QV S PNSQ+   G  QE               DQ  Q+FPRTQ P QVDQ  A  
Sbjct: 255 ADYGQVYSGPNSQS---GATQEPPSGPRPPPFGFAVPDQPRQIFPRTQFPGQVDQAVA-- 309

Query: 667 FNLPFGGRSGSVS---IPPRHTTFPYAGQPGPRSPAPQMGMQNFISAPQRPNFPTPGVQG 723
               FGGRSGS+S    PPRH  FPYAGQP PRS A QMGM+NFISAPQ PN  + G Q 
Sbjct: 310 ----FGGRSGSISNSIPPPRHGVFPYAGQPAPRSSAAQMGMKNFISAPQIPNLTSAGSQR 365

Query: 724 GMHIRQNYP-QRAWPDIPMPLNQKFGNNHPMAS 755
           GM IR++Y  Q AW DI MPLNQKF +N PMAS
Sbjct: 366 GMPIRKSYATQMAWADISMPLNQKFVSNPPMAS 398


>Glyma11g36470.1 
          Length = 430

 Score =  292 bits (748), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 209/418 (50%), Positives = 230/418 (55%), Gaps = 49/418 (11%)

Query: 370 MVSTFGAQXXXXXXXXXXXXXXXNHHVSMQALPPRPMLQHSHMNQASPLGHIVPPRNPSS 429
           M STFGAQ               N HVS+Q  PPR +LQ+SHM Q SPLGHI P RNP  
Sbjct: 1   MASTFGAQPGPVAGFQSIIP---NQHVSVQTPPPRQILQYSHMTQTSPLGHIGPLRNP-- 55

Query: 430 VPVQNFSAPTNASVSFQVTLSQPTPIGHLQTPVSSMPQPMSGISPSPMPNQPLTPLGVSP 489
             VQN S P N+S SF VTLSQ  PIG  QT VSSM  P+SGIS  P+PNQPLT LGVS 
Sbjct: 56  --VQNLSTP-NSSFSFPVTLSQAMPIGQHQTSVSSMHLPISGISSPPIPNQPLTHLGVSS 112

Query: 490 RQSGGPVSL------SNLGXXX--------------XXXXXXXXXXSLGQSATFSQHQ-- 527
             +  PV++      SN+G                            + +SATF  HQ  
Sbjct: 113 GLNEAPVTVKMSVGPSNMGPVVPPARPVSLHQQPDVAFKPPQSNMSMITRSATFLPHQVG 172

Query: 528 ------XXXXXXXXXXXXXXXXXXTYSSRPVSFPSPRMSPSNPLPQQSGTPNSFSGVTPY 581
                                    + S PVSFPS  +SPS PLPQQ+G PN  SGV PY
Sbjct: 173 ISPGQPSSLRSMPVPIRAPTHLSANHLSGPVSFPSRGISPSLPLPQQAGIPNLASGVAPY 232

Query: 582 QAHATPLVLTTSNSGNFTFQSQRPNADYSQVASRPNSQATAEGGIQEXXXXXXXXXXXXX 641
             H  P VL TS SGNFTFQS  PNADY QV S PNSQ+   G  QE             
Sbjct: 233 HTHVKPPVLGTSKSGNFTFQSHLPNADYGQVFSGPNSQS---GATQEPPSGPRPPPFGFA 289

Query: 642 XXDQRLQMFPRTQSPSQVDQTQAHLFNLPFGGRSGSVS---IPPRHTTFPYAGQPGPRSP 698
             DQ  Q+FPRTQ P QVDQ       +PFG R GS+S    PPRH  FPYAGQP PRS 
Sbjct: 290 VPDQPRQIFPRTQFPGQVDQA------VPFGVRLGSISNSIPPPRHAVFPYAGQPAPRSS 343

Query: 699 APQMGMQNFISAPQRPNFPTPGVQGGMHIRQNY-PQRAWPDIPMPLNQKFGNNHPMAS 755
            PQMGM+NFISAPQ PN    G Q GM IRQ+Y PQ A PDIPMPLNQKF NN PMAS
Sbjct: 344 VPQMGMKNFISAPQMPNLTNAGAQRGMPIRQSYPPQMARPDIPMPLNQKFVNNPPMAS 401


>Glyma11g36480.1 
          Length = 252

 Score =  268 bits (684), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/213 (66%), Positives = 161/213 (75%), Gaps = 29/213 (13%)

Query: 1   MIAEFDPTSALEPHKMSRASSAALTSGQKPSKFAAKSGFVIPKNKLSGSLVPVFRGAKKH 60
           M AE D T A EPHKMS     A TSGQK S F+AKSGFVIPKNKLSGSLVP+FRGAK+H
Sbjct: 1   MSAEIDSTYAPEPHKMS----GATTSGQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKQH 56

Query: 61  GVTGGAVNEESLKQIERVTKWGPDLTQDASVKRAKAMALQIRVDQITKQLESEELQIGDT 120
           GVT  A+NEES KQIER +KWGPDLTQDA+V+R K +ALQIRVDQITKQLESE+L++GDT
Sbjct: 57  GVTAAAINEESSKQIERRSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDT 116

Query: 121 QNLPIASENPNQSTSGSDMNSKKSEMLELEKREAIG--------------------EILK 160
           QNL     NP+QS SG  +NSKK+EMLELEKREAIG                    EILK
Sbjct: 117 QNL-----NPDQSISGPQINSKKAEMLELEKREAIGLFSLKYIFPFYSSPLLHTGCEILK 171

Query: 161 LDPSYKPPPGFKPLLKEASIPLPVQEHPGHKFI 193
           LDPSYKPP GFKPLLKEASIPLP+++   + F+
Sbjct: 172 LDPSYKPPRGFKPLLKEASIPLPIKKKTINSFV 204


>Glyma18g00390.3 
          Length = 213

 Score =  246 bits (628), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/203 (66%), Positives = 148/203 (72%), Gaps = 34/203 (16%)

Query: 1   MIAEFDPTSALEPHKMSRASSAALTSGQKPSKFAAKSGFVIPKNKLSGSLVPVFRGAKKH 60
           M AE D T A EPHKMS         GQK S F+AKSGFVIPKNKLSGSLVP+FRGAKKH
Sbjct: 1   MSAEIDSTCAPEPHKMS---------GQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKKH 51

Query: 61  GVTGGAVNEESLKQIERVTKWGPDLTQDASVKRAKAMALQIRVDQITKQLESEELQIGDT 120
           GVT GA NEES KQIER +KWGPDLTQDA+V+R K +ALQIRVDQITKQLESE+L++GDT
Sbjct: 52  GVTVGATNEESSKQIERKSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDT 111

Query: 121 QNLPIASENPNQSTSGSDMNSKKSEMLELEKREAIGEILKLD------------------ 162
           QNL     NP+QS SG  + SKKSEMLELEKREAIG +  L                   
Sbjct: 112 QNL-----NPDQSKSGPRITSKKSEMLELEKREAIG-LFSLKYIFPFYSSPLLRTGCVFH 165

Query: 163 -PSYKPPPGFKPLLKEASIPLPV 184
            PSYKPP GFKPLLKEASIPLPV
Sbjct: 166 YPSYKPPRGFKPLLKEASIPLPV 188


>Glyma09g36510.1 
          Length = 712

 Score =  100 bits (248), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 107/181 (59%), Gaps = 20/181 (11%)

Query: 98  ALQIRVDQITKQLESEELQIGDT-QNLPIASENPNQSTSGSDMNSKK---SEMLELEKRE 153
           AL  R+ +I++ L+S  L + D  +     S  P     G  +N+++    E L+ E++E
Sbjct: 79  ALNSRLLEISRMLQSG-LPLDDRPEGARSPSPEPVYDNMGIRINTREYRARERLQKERQE 137

Query: 154 AIGEILKLDPSYKPPPGFKPLLKEASIPLPVQEHPGHKFIGLIYGPEGDTQKRLEKETGA 213
            I +I+K +P++KPP  ++P   +  + +P++E+PG+ FIGLI GP G+TQKR+EKETGA
Sbjct: 138 IISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGA 197

Query: 214 KIKIHGTRADTGDKGEIKPG-----TDIQ---CSYQEMHVNISADSFDKVDAAVSIIELL 265
           KI I G       KG +K G      D++      +++HV + A++ + ++AA  ++E L
Sbjct: 198 KIVIRG-------KGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPESLEAAAGMVEKL 250

Query: 266 L 266
           L
Sbjct: 251 L 251


>Glyma12g00850.1 
          Length = 780

 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 107/181 (59%), Gaps = 20/181 (11%)

Query: 98  ALQIRVDQITKQLESEELQIGDT-QNLPIASENPNQSTSGSDMNSKK---SEMLELEKRE 153
           AL  R+ +I++ L+S  L + D  +     S  P     G  +N+++    E L+ E++E
Sbjct: 147 ALNSRLLEISRMLQSG-LPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLQKERQE 205

Query: 154 AIGEILKLDPSYKPPPGFKPLLKEASIPLPVQEHPGHKFIGLIYGPEGDTQKRLEKETGA 213
            I +I+K +P++KPP  ++P   +  + +P++E+PG+ FIGLI GP G+TQKR+EKETGA
Sbjct: 206 IISQIIKKNPAFKPPVDYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGA 265

Query: 214 KIKIHGTRADTGDKGEIKPG-----TDIQ---CSYQEMHVNISADSFDKVDAAVSIIELL 265
           KI I G       KG +K G      D++      +++HV + A++ + ++AA  ++E L
Sbjct: 266 KIVIRG-------KGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPESLEAAAGMVEKL 318

Query: 266 L 266
           L
Sbjct: 319 L 319