Miyakogusa Predicted Gene

Lj3g3v0850570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0850570.1 tr|G7IWL8|G7IWL8_MEDTR E3 ubiquitin-protein
ligase makorin OS=Medicago truncatula GN=MTR_3g028190 PE,83.02,0,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_1,Zinc finger,
RING-type, conserved site; zi,CUFF.41582.1
         (318 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42750.1                                                       534   e-152
Glyma08g16340.1                                                       532   e-151
Glyma15g42820.1                                                       328   4e-90
Glyma08g16360.1                                                       298   6e-81
Glyma14g12760.1                                                        62   9e-10

>Glyma15g42750.1 
          Length = 363

 Score =  534 bits (1376), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/324 (80%), Positives = 277/324 (85%), Gaps = 8/324 (2%)

Query: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGVCAYGSRCRYDHVKXXXXX 60
           MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICT+YQKGVCAYGSRCRYDHVK     
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGVCAYGSRCRYDHVKASREQ 60

Query: 61  XXXXXXXVVEHQPLVSGSFVFGNPRISSNGVAAAAESSLSKSPYIHTSKPAWNQES---- 116
                  V E Q  VS +  FGN R + NGVA AAE SLS+SPY   S+PAWNQE     
Sbjct: 61  SSAPSSSVTEPQTPVSDTVAFGNTRATFNGVATAAEFSLSRSPYFLPSEPAWNQEPVWNQ 120

Query: 117 --NYHDLLGEDDVDVGQPITTLPSELSICSFAAVGNCPRGEKCPHIHGDLCPTCGKHCLH 174
              Y++ LGED+V  GQ I T PSELSICSFAA GNCPRGEKCPHIHGDLCPTCGKHCLH
Sbjct: 121 EFGYNEPLGEDNV--GQTIITSPSELSICSFAAAGNCPRGEKCPHIHGDLCPTCGKHCLH 178

Query: 175 PFRPEEREEHIKSCEDKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPF 234
           PFRPEEREEH+KSCE+K KHL+ALKRSQEIECSVCLE VLSKPTAAE KFGLLSECDHPF
Sbjct: 179 PFRPEEREEHMKSCENKHKHLDALKRSQEIECSVCLELVLSKPTAAECKFGLLSECDHPF 238

Query: 235 CISCIRNWRNSNPTLGMDVNGTLRACPICRKLSYFVVPSVIWYSTSEEKQEIVDTYKAKL 294
           CISCIRNWR+SNPTLGMDVN TLRACPICRKLSYFV+PSVIWYST+EEKQEI+D YKAKL
Sbjct: 239 CISCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVIPSVIWYSTTEEKQEIIDNYKAKL 298

Query: 295 KSIDCKHFDFGDGNCPFGTSCFYK 318
           KSIDCKHFDFG+GNCPFGTSCFYK
Sbjct: 299 KSIDCKHFDFGEGNCPFGTSCFYK 322


>Glyma08g16340.1 
          Length = 363

 Score =  532 bits (1370), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/324 (79%), Positives = 277/324 (85%), Gaps = 8/324 (2%)

Query: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGVCAYGSRCRYDHVKXXXXX 60
           MSKR LCKFFAHGACLKGEHCEFSHDWKDPPNN+CT+YQKGVCAYGSRCRYDHVK     
Sbjct: 1   MSKRFLCKFFAHGACLKGEHCEFSHDWKDPPNNVCTFYQKGVCAYGSRCRYDHVKASREQ 60

Query: 61  XXXXXXXVVEHQPLVSGSFVFGNPRISSNGVAAAAESSLSKSPYIHTSKPAWN------Q 114
                  V+E Q LVS +  FGN R +SNGVA  AE SLS SPY+  S+PAWN      Q
Sbjct: 61  SSAPSSSVIEPQTLVSDTVAFGNTRAASNGVATGAEFSLSSSPYLLPSEPAWNRELVWNQ 120

Query: 115 ESNYHDLLGEDDVDVGQPITTLPSELSICSFAAVGNCPRGEKCPHIHGDLCPTCGKHCLH 174
           E  YH+ L ED+V  GQ I T PSELSICSFA  GNCPRGEKCPHIHGDLCPTCGKHCLH
Sbjct: 121 EFGYHEPLWEDNV--GQSIITSPSELSICSFAGAGNCPRGEKCPHIHGDLCPTCGKHCLH 178

Query: 175 PFRPEEREEHIKSCEDKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPF 234
           PFRPEEREEH+K+CE+K+KHLEALK+SQEIECSVCLE VLSKPTAAE KFGLLSECDHPF
Sbjct: 179 PFRPEEREEHMKTCENKRKHLEALKQSQEIECSVCLEHVLSKPTAAECKFGLLSECDHPF 238

Query: 235 CISCIRNWRNSNPTLGMDVNGTLRACPICRKLSYFVVPSVIWYSTSEEKQEIVDTYKAKL 294
           CISCIRNWR+SNPTLGMDVN TLRACPICRKLSYFV+PSVIWYST+EEKQEI++ YKAKL
Sbjct: 239 CISCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVIPSVIWYSTTEEKQEIINNYKAKL 298

Query: 295 KSIDCKHFDFGDGNCPFGTSCFYK 318
           KSIDCKHFDFG+GNCPFGTSCFYK
Sbjct: 299 KSIDCKHFDFGEGNCPFGTSCFYK 322


>Glyma15g42820.1 
          Length = 453

 Score =  328 bits (841), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 174/323 (53%), Positives = 218/323 (67%), Gaps = 23/323 (7%)

Query: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGVCAYGSRCRYDHVKXXXXX 60
           MS RV CKF+A GACLKG+ C+F+H+ KD   +IC+YY+KG CAYGSRCRY HVK     
Sbjct: 1   MSNRV-CKFYARGACLKGDQCDFAHEKKD---DICSYYKKGSCAYGSRCRYKHVKASQAS 56

Query: 61  XXXXXXXVVEHQPLVSGSFVFGNPRISSNGVAAAAESSLSKSPYIHTSKPAWNQESNYHD 120
                       P+V+ +      + +S+ V  A +SS S        +   +Q+ N   
Sbjct: 57  SSANGRHSPVLDPVVNHTI-----KGTSSWVPKAVKSSSSDK------RARSSQQKNLPS 105

Query: 121 LLGEDDVDVGQPITTLPSELSICSFAAVGNCPRGEKCPHIHGDLCPTCGKHCLHPFRPEE 180
           L  E+DV      + +PSE   C+FAA  NCP  +KC  IHG+ C  C K CLHP   +E
Sbjct: 106 L--ENDVGQSSTSSVIPSEHLFCAFAA-ANCPLEDKCSRIHGNQCLYCRKFCLHPTDRKE 162

Query: 181 REEHIKSCEDKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCISCIR 240
           +E H+++CE K+K+L+ALK SQE+EC+VCLERVLSKP  A+ KFGLL ECDH FC+SCIR
Sbjct: 163 KENHLRTCEKKEKYLQALKDSQEVECNVCLERVLSKPKPADCKFGLLPECDHAFCLSCIR 222

Query: 241 NWRNSNPTLGMDVN-----GTLRACPICRKLSYFVVPSVIWYSTSEEKQEIVDTYKAKLK 295
           NWRNS PT GMD++      T+R CP+CRKLSYFV+PS IWYST EEKQEI+D YKA  K
Sbjct: 223 NWRNSAPTSGMDISNAGTANTVRTCPVCRKLSYFVIPSGIWYSTKEEKQEIIDNYKANCK 282

Query: 296 SIDCKHFDFGDGNCPFGTSCFYK 318
            IDCKHF+FG+GNCPFG SCFYK
Sbjct: 283 LIDCKHFNFGNGNCPFGASCFYK 305


>Glyma08g16360.1 
          Length = 412

 Score =  298 bits (762), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 167/324 (51%), Positives = 201/324 (62%), Gaps = 65/324 (20%)

Query: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGVCAYGSRCRYDHVKXXXXX 60
           MS R  CKF+A GACLKG+ C+F+H+ KD   +IC+YYQKG CAYGSRCRY HVK     
Sbjct: 1   MSNR-FCKFYARGACLKGDQCDFAHEKKD---DICSYYQKGFCAYGSRCRYKHVKA---- 52

Query: 61  XXXXXXXVVEHQPLVSGSFVFGNPRISSNGVAAAAESSLSKSPYIHTSKPAWNQESNYHD 120
                                  P  S+NG           SP +               
Sbjct: 53  ---------------------SQPSSSANG---------RHSPVL--------------- 67

Query: 121 LLGEDDVDVGQPITTLPSELSICSFAAVGNCPRGEKCPHIHGDLCPTCGKHCLHPFRPEE 180
               D V V    + +PSE   C+FAA  NCP  +KC  IHG+ C  C K CLHP   +E
Sbjct: 68  ----DPVAVNTS-SAIPSEHLFCAFAA-ANCPLEDKCSRIHGNQCLYCRKFCLHPSDWKE 121

Query: 181 REEHIKSCEDKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCISCIR 240
           +E H+++CE K K+L+AL+ SQE+EC+VCLERVLSKP  A+ KFGLL ECDH FC+SCIR
Sbjct: 122 KENHLRTCEKKGKYLKALEDSQEVECNVCLERVLSKPKPADCKFGLLPECDHAFCLSCIR 181

Query: 241 NWRNS-NPTLGMDVN-----GTLRACPICRKLSYFVVPSVIWYSTSEEKQEIVDTYKAKL 294
           NWRNS  PT GMD+       T+R CP+CRKLSYFV+PS IWYST EEKQEI++ YKA  
Sbjct: 182 NWRNSAAPTSGMDIGNAGTANTVRTCPVCRKLSYFVIPSGIWYSTKEEKQEIINNYKANC 241

Query: 295 KSIDCKHFDFGDGNCPFGTSCFYK 318
           K IDCKHF+FG+GNCPFG SCFYK
Sbjct: 242 KLIDCKHFNFGNGNCPFGASCFYK 265


>Glyma14g12760.1 
          Length = 29

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/29 (89%), Positives = 28/29 (96%)

Query: 5  VLCKFFAHGACLKGEHCEFSHDWKDPPNN 33
           LCKFFA+GACLKG+HCEFSHDWKDPPNN
Sbjct: 1  FLCKFFAYGACLKGKHCEFSHDWKDPPNN 29