Miyakogusa Predicted Gene

Lj3g3v0828270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0828270.1 tr|G7KJU2|G7KJU2_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_6g092570 PE=4
SV=1,27.22,2e-17,DUF295,Protein of unknown function DUF295;
seg,NULL,CUFF.41574.1
         (422 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g11470.1                                                       287   2e-77
Glyma02g04930.1                                                       115   7e-26
Glyma04g02200.1                                                        88   1e-17
Glyma16g22900.1                                                        59   1e-08

>Glyma10g11470.1 
          Length = 368

 Score =  287 bits (734), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 185/382 (48%), Positives = 228/382 (59%), Gaps = 29/382 (7%)

Query: 52  DWSQLPAELLRLISERIDTPLHLL-RFRSVCSIWRSSAPPVIPLHHYPFDFSTLPDHDAF 110
           DWS+LP +LL  IS+ +      L RFRSVCS WRSS PP       PF+ S    +   
Sbjct: 3   DWSELPKDLLHKISQLLLESPLYLLRFRSVCSSWRSSTPPS------PFNPSISLTN--- 53

Query: 111 TFSLTKRTVVLIXXXXXXXXXXXX--WLVKIGQDLYGRN-RLWHPLYRNPHFAIHEKRVL 167
           TFSL+ RT++L+              WLVK+  D +    RL+HPL R P      +  L
Sbjct: 54  TFSLSHRTLLLLNPNSNPNPNPRPRPWLVKLSLDPHASTARLFHPLSRFP--MKLPRFAL 111

Query: 168 DLYNLSALPIGNEFDLRQSP-PNGSLYMEKVVAVQGKHGVS--VLLTIHISGKLALFRSG 224
           DL+ L AL +G EF L  +     SLY+EK+V +   H      LLTIH+SGKLALFRSG
Sbjct: 112 DLFTLPALDLGREFLLTNTRHTRDSLYIEKLVFLPLTHRKDRFALLTIHVSGKLALFRSG 171

Query: 225 DECWRIIPDMPTPYDDVCVFNGRHFAVDGTGRTVRVR-SDFELEVVAEAVFGGDRKFLVE 283
           ++ W +IPDMPTPYDDVCVF G  +  D  GRTVRVR  D  L + AE VFGGD+KFLVE
Sbjct: 172 EDGWTVIPDMPTPYDDVCVFKGNLYGADSNGRTVRVRPDDGGLTLAAEPVFGGDKKFLVE 231

Query: 284 SEGELLLVDKHMSSNCXXXXXXXXXXXXXXXXXXXVYRVGWERAAKFDVFKLDEKEKRWV 343
           SEG LLLVD ++S                      V  +GWER  KFDVF+LDE+ K+WV
Sbjct: 232 SEGALLLVDMYLS-----YYSCTQGLFHEDFDEEDVAGMGWERTVKFDVFRLDEEGKKWV 286

Query: 344 EVTSLGDRVLFLGDYCCFSASASDLCVGRGNCVVFKDDALECE-----IGVFPLDVGRVS 398
           E+T LG+RVLFLGD C FSASA DL +GRGNCV F+DD L        +GVF LD G++S
Sbjct: 287 ELTDLGERVLFLGDDCAFSASAKDLNLGRGNCVAFRDDGLGFNRVLNGMGVFRLDDGKIS 346

Query: 399 PLSNHPDYSRLFLPREECIGLH 420
           PLS    +S LF P  + +GL 
Sbjct: 347 PLSECAGFSELFCPPPDWVGLQ 368


>Glyma02g04930.1 
          Length = 379

 Score =  115 bits (289), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 159/356 (44%), Gaps = 48/356 (13%)

Query: 52  DWSQLPAELLRLISERIDTPLHLLRFRSVCSIWRSSAPPVIPLH-HYPFDFSTLPDHDAF 110
           DWS+LP EL   I + ++  + ++RFRSVC   RSS PP +P    +P       +H   
Sbjct: 6   DWSELPIELWPKIGKSLENHMDIVRFRSVCESCRSSMPPPLPNSPSFPMQIPHPLNHSIE 65

Query: 111 TFSLTKRTVVLIXXXXXXXXX--------XXXWLVKIGQDLYGRNRLWHPL-YRNPHFAI 161
           T  L + TV +I                    WL+K+ +     +   HPL   +P   I
Sbjct: 66  TL-LNQATVYVIEPTDANGASKLEPLPVSSKGWLIKVEESKNHNHN--HPLTLLSP---I 119

Query: 162 HEKRVLDLYNLSALPIGNEFDLR-------QSPPNGSLYMEKVVAVQGKHGV----SVLL 210
            +++++  +  ++  + N  + R        +    S  + KVV       +    SV  
Sbjct: 120 SDRKIVYPHGTNSPVLWNLLEFRVIELCKSYTTNISSAAVSKVVFFPNSPWIGAQDSVAC 179

Query: 211 TIHISGKLALFRSGDECWRIIPDMPTPYDDVCVFNGRHFAVDGTGRTVRV-RSDFELEVV 269
            I + GKL   + GDE W ++ +    YDDV VF G+ +  D  G    +  S  +L   
Sbjct: 180 CIFLEGKLGFMKHGDEKWTLVDNKNFFYDDVIVFKGQFYVTDDRGTISWIDTSSLKLVQF 239

Query: 270 AEAVFG-GDRKFLVESEGELLLVDKHMSSNCXXXXXXXXXXXXXXXXXXXVYRVGWE-RA 327
           +  + G GD+K LVES G L +VD++  S                      Y  G E R 
Sbjct: 240 SPPLCGLGDKKHLVESCGSLYVVDRYYESETSRRRN---------------YVGGREDRV 284

Query: 328 AK---FDVFKLDEKEKRWVEVTSLGDRVLFLGDYCCFSASASDLCVGRGNCVVFKD 380
           A    F V+KLDE+  +WV+V +LGDR   LG+ C FS SA +L   + NC+ F D
Sbjct: 285 AAVVCFKVYKLDEEWGKWVDVKNLGDRAFVLGNSCSFSVSAKELTGYQENCIYFTD 340


>Glyma04g02200.1 
          Length = 372

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 156/392 (39%), Gaps = 64/392 (16%)

Query: 52  DWSQLPAELLRLISERIDTPLHLLRFRSVCSIWRSSAPPVIPLHHYP-FDFSTLPDHDAF 110
           +W +LP ELL  IS+ +   +  LRFRSVC  WRSS P  IPLH  P   +  L     F
Sbjct: 4   EWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPK-IPLHLPPQLPWLMLSRRAFF 62

Query: 111 TFSLTKRTVV--LIXXXXXXXXXXXXWLVKIGQDLYGRNRLWHPLYRN-----PHFAIHE 163
             SL K  ++                WLV +  D   + RL +PL R      P  A   
Sbjct: 63  DLSLNKTHLLNPQPSHRTRICGSSHGWLVML--DETPQIRLLNPLTRATRPLPPLHAFPN 120

Query: 164 KRVLDLYNLSALPIGNEFDLRQSPPNGSLYMEKVVAVQGKHGVSVLLTIHISGKLALFRS 223
               D  N     +G E+ ++   P G LY     A   +   +  L       LA  R+
Sbjct: 121 VVAFDHAN-----VGREYLIQN--PYGGLY-----AFNLRQMCNSFLG---KNNLAFCRN 165

Query: 224 GDECWRII---PDMPTPYDDVCVFNGRHFAVDGTGRTVRVRSDFE---------LEVVAE 271
           G + W  +    +    ++DV  +NG  FAV   G T+ V    E         ++    
Sbjct: 166 GYDSWIFLNGEEEEMNCWEDVVNYNGLFFAVS-KGGTIAVCDAGEGCFPPRVSIIQTTTP 224

Query: 272 AVFGGDRKFLVESEGELLLVDKHMSSNCXXXXXXXXXXXXXXXXXXXVYRVGWERAAKFD 331
             F GD  + V S G++LL+ + +  +                    VYR        F+
Sbjct: 225 FGFAGDIHYAVFSAGDMLLLIRVLDQD---------FSDHAGEESDLVYRT-----VGFE 270

Query: 332 VFKLDEKEKRWVEVTSLGDRVLFLGDYCCFSASASDLCVGRGNCVVFKDDALEC------ 385
           VFK++     W  V +LG+RVLF+G     S  ASD      +C+ F DD  E       
Sbjct: 271 VFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDAC 330

Query: 386 ---EIGVFPLDVGRVSPLS--NHPDYSRLFLP 412
              ++GVF L    + PL   N    SRL  P
Sbjct: 331 GKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWP 362


>Glyma16g22900.1 
          Length = 361

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 66/142 (46%), Gaps = 21/142 (14%)

Query: 281 LVESEGELLLVDKHMSSNCXXXXXXXXXXXXXXXXXXXVYRVGWERAAK-FDVFKLDEKE 339
           LVES G L +VD++  S                     + R   E A + F V+KLDE+ 
Sbjct: 181 LVESCGSLYVVDRYYGSE-------------PPRRRNYLGRADREAAVEYFKVYKLDEEW 227

Query: 340 KRWVEVTSLGDRVLFLGDYCCFSASASDLCVGRGNCVVFKDDALECEIGVFPLDVGRVSP 399
             WV+V  LGDR   LG+ C FS SA +L   +GNC+ F D     ++ V+ LD   V  
Sbjct: 228 GTWVDVKHLGDRAFVLGNCCSFSVSAKELMGYQGNCIYFMDIF---DVHVYNLDYCMVPY 284

Query: 400 LSNHPDYSRLFLPREECIGLHC 421
           L   P  S +   +EE    HC
Sbjct: 285 LFFMPVNSLVMGSQEE----HC 302