Miyakogusa Predicted Gene

Lj3g3v0828230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0828230.1 tr|G7ZWA7|G7ZWA7_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_038s0021 PE=4 SV=1,78.05,0.000000001,seg,NULL;
DUF295,Protein of unknown function DUF295,gene.g46242.t1.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g11470.1                                                        65   2e-11

>Glyma10g11470.1 
          Length = 368

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)

Query: 77  EDEDKEVLGW-----FYVYRLDEKEKMWVEMTSLGNRVLFLGNYCCFSASASDLRVG 128
           ++ED   +GW     F V+RLDE+ K WVE+T LG RVLFLG+ C FSASA DL +G
Sbjct: 258 DEEDVAGMGWERTVKFDVFRLDEEGKKWVELTDLGERVLFLGDDCAFSASAKDLNLG 314