Miyakogusa Predicted Gene

Lj3g3v0824870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824870.1 Non Chatacterized Hit- tr|I1NHX5|I1NHX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24950 PE,77.76,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; STRUCTURAL
MAINTENANCE OF CHROMOSOMES 5 S,CUFF.41547.1
         (1052 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34020.1                                                      1590   0.0  
Glyma09g36430.1                                                        66   2e-10
Glyma13g27210.1                                                        54   9e-07
Glyma12g36520.1                                                        54   1e-06

>Glyma20g34020.1 
          Length = 1013

 Score = 1590 bits (4116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 789/1052 (75%), Positives = 867/1052 (82%), Gaps = 39/1052 (3%)

Query: 1    MAESRPPKRSKITRGEDDYMPGNILEIELHNFMTFDYLKCKPAPRLNLVIGPNGSGKSSL 60
            MAESRPPKR KI+RG+DDYMPGNILEIEL NFMTFDYLKCKP PRLNLVIGPNGSGKSSL
Sbjct: 1    MAESRPPKRPKISRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSL 60

Query: 61   VCAIALGLGGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEERLIIMRKINTNNKSE 120
            VCAIALGL GEPQLLGRATSIGAYVKRGEESGYIKITLRGDHK E + IMRKINTNNKSE
Sbjct: 61   VCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKVEHITIMRKINTNNKSE 120

Query: 121  WLFNGNVVPKKDVAESIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 180
            WL NGNVVPKKDVAE+IQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL
Sbjct: 121  WLLNGNVVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 180

Query: 181  PEQHRALIDKSRALKHIELSLEKNEGTLKQLKERNAELEKDVERVRQRDELLAKAESMKK 240
            PEQHRAL+DKSRALKHIELSLEKNEGTLKQLKERNAELE DVERVRQRDELLAKAE+MKK
Sbjct: 181  PEQHRALVDKSRALKHIELSLEKNEGTLKQLKERNAELETDVERVRQRDELLAKAEAMKK 240

Query: 241  KLPWLRYDMKQAEYREAKKRXXXXXXXXXXXXXXXXXXXXPIKKQKDEKAALDANCKKVS 300
            KLPWLRYDMKQAEYREAK+R                    PI KQK+EKAAL A CKKVS
Sbjct: 241  KLPWLRYDMKQAEYREAKERENDAAKALEEAAELLNDLKEPIMKQKEEKAALYAKCKKVS 300

Query: 301  SRLSDNAKKRMDLREKDSQLDVELQGKYKDMEELRGQEKSRQQXXXXXXXXXXXXXXXXX 360
            +  S+NAKKR +L E++++LDVEL+GKYK+MEELR QE++RQQ                 
Sbjct: 301  NHASENAKKRTELMEEENKLDVELKGKYKEMEELRRQEETRQQKLVKAREEVAIAELELE 360

Query: 361  NLHPFVPPKDELQRLKDEIRRLDTSASQVRQNRSQAESEIKHKKSLLMRCKERLRDMNNK 420
            NL  +VPPKDEL RL +                                       MNNK
Sbjct: 361  NLPLYVPPKDELVRLIE---------------------------------------MNNK 381

Query: 421  STKCLLALQKSGVDKIFEAYKWVQENRNQFNKEVFGPVLLEVNVPNREHARYLEGHVAYY 480
            STKCL ALQ+SG +KIFEAYKWVQ++R++FNKEV+GPVLLEVNV N++HA YLEG VA+Y
Sbjct: 382  STKCLHALQRSGAEKIFEAYKWVQDHRHEFNKEVYGPVLLEVNVSNKDHAAYLEGQVAHY 441

Query: 481  VWKSFMTQDSRDRDLLAKNLKFFDVPILNYTGGDGHPIRPFEISEDMRALGINSRLDQIF 540
             WKSF+TQDS DRDLLAK+L+FFDV +LNYTGGDG    PFEISED RALGI SRLDQIF
Sbjct: 442  TWKSFITQDSGDRDLLAKHLRFFDVNVLNYTGGDGPQREPFEISEDKRALGIYSRLDQIF 501

Query: 541  DAPVAVKEMLIKNSSLDNSYIGTKETDQKSEVVPRLGIMDLWTPENHYRWSGSRYGNHVS 600
            DAP+AVKE+LI   +LD SYIG++++DQ +  V +LGI+D WTPENHY WS SRY N+ S
Sbjct: 502  DAPIAVKEVLISQFNLDYSYIGSEKSDQNAGEVRKLGILDFWTPENHYHWSKSRYANYES 561

Query: 601  ASVEQVNPPDLLSNTSNVGXXXXXXXXXXXXXXQIAPLEESIKRSQDEERSLQNQAADLR 660
            A V QV  P LL N  NVG               +A LEES+KR  DEERSL NQ+A+LR
Sbjct: 562  AVVNQVQRPQLLLNNLNVGEIEKLSSEQRELEEIVANLEESVKRFHDEERSLLNQSANLR 621

Query: 661  KQWETVSTTAQNEQRKRKEIVHRIEQRKGILKSMEEKVDMDTEIAKLVEQATKCNIQRFH 720
            KQWE +S T QNEQ+KR+ I+ RI+Q+K  LK MEE+ D+DTEIAKLV+QATK NI+RFH
Sbjct: 622  KQWEDISITVQNEQKKRQAIISRIDQKKKFLKLMEERDDLDTEIAKLVDQATKYNIRRFH 681

Query: 721  NSIKIKDLLVEAMGYRQNVVELRMSLIEFEAKIGEMEANLKQHDKFALQASLHFDNCKKE 780
            N+++IKDLLVEA+ YR+  +E RM+ IEF+AKI EMEANLKQH+KFALQASLHFDNCKKE
Sbjct: 682  NAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIVEMEANLKQHEKFALQASLHFDNCKKE 741

Query: 781  AENCKQQLTDSLNYAKSIARLTPELEKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNI 840
            +ENC+Q LTDSL YAKSIARLTPEL+KEFLEMPTTIE+LEAAIQDTTS+ANSILFVNHNI
Sbjct: 742  SENCRQDLTDSLKYAKSIARLTPELKKEFLEMPTTIEDLEAAIQDTTSEANSILFVNHNI 801

Query: 841  LEQYEHRQRQIEDLAAKLEADKNECRRCLAELDNIKGKWLPTLRNLVAQINETFRCNFQE 900
            LEQYE RQ+QIEDLAAKLEADK E  RCLAEL+NIKGKWLPTLRNLVA+INETF  NFQE
Sbjct: 802  LEQYEDRQQQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVAKINETFSFNFQE 861

Query: 901  MAVAGEVSLDEHDTNFDQFGIHIKVKFRENGQLQILSAHHQSGGERSVSTIVYLVSLQDL 960
            MAVAGEVSLDE D +FDQFGI IKVKFRENGQLQ LSAHHQSGGERSVSTIVYLVSLQDL
Sbjct: 862  MAVAGEVSLDERDMDFDQFGILIKVKFRENGQLQNLSAHHQSGGERSVSTIVYLVSLQDL 921

Query: 961  TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN 1020
            TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN
Sbjct: 922  TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN 981

Query: 1021 VMNGPWIEQPSKVWTTGDPWSIITGHVRQTLC 1052
            VMNGPWIEQPSKVWT GD WSIITG V  T C
Sbjct: 982  VMNGPWIEQPSKVWTAGDRWSIITGLVGDTHC 1013


>Glyma09g36430.1 
          Length = 1080

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 111/237 (46%), Gaps = 16/237 (6%)

Query: 21  PGNILEIELHNFMTFDYLKCKPAPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATS 80
            G +  + L NFM     + +    +N + G NGSGKS+++ A+ +  G   +   RA++
Sbjct: 17  AGIVKRLRLENFMCHSKHETEFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAST 76

Query: 81  IGAYVKRGEESGYIKITLRGDHKEE--------RLIIMRKINTNNKSEWLFNGN----VV 128
           +  ++K G  +  I++ ++ + ++          +I+ R+I+ +  S  L +      V 
Sbjct: 77  LKDFIKTGATTAVIQVEIQNEGEDAFKPEIYGPVIIVERRISESTSSTTLKDHQGRKVVS 136

Query: 129 PKKDVAESIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALI 188
            K D+ E ++ FNI V N    + QD+  EF      +   +  K      L +Q   L+
Sbjct: 137 RKADLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNK---DKFKFFYKATLLQQVNDLL 193

Query: 189 DK-SRALKHIELSLEKNEGTLKQLKERNAELEKDVERVRQRDELLAKAESMKKKLPW 244
           +  S  +   +L +E+ E  ++ ++    EL+  +  +   +++  + + +KKKL W
Sbjct: 194 ESISNEITSAQLVVEELETAIRPIENELNELQVKIRNMEHVEQISIQVQQLKKKLAW 250


>Glyma13g27210.1 
          Length = 1171

 Score = 53.9 bits (128), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 15/168 (8%)

Query: 24  ILEIELHNFMTFDYLKCKPA--PRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSI 81
           I EI L  F ++      P   P  N + G NGSGKS+++ +I   LG       RA+++
Sbjct: 3   IKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNL 62

Query: 82  GAYVKRGEESGYIKITLR-------------GDHKEERLIIMRKINTNNKSEWLFNGNVV 128
              V +  ++G  K T+              G      + + R+I    ++++L NG + 
Sbjct: 63  QELVYKQGQAGITKATVSVVFDNSNSSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLA 122

Query: 129 PKKDVAESIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVG 176
               V        + VNN    + Q R+ +   + P ++L   E+A G
Sbjct: 123 QPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAG 170


>Glyma12g36520.1 
          Length = 1171

 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 15/168 (8%)

Query: 24  ILEIELHNFMTFDYLKCKPA--PRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSI 81
           I EI L  F ++      P   P  N + G NGSGKS+++ +I   LG       RA+++
Sbjct: 3   IKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNL 62

Query: 82  GAYVKRGEESGYIKITLR-------------GDHKEERLIIMRKINTNNKSEWLFNGNVV 128
              V +  ++G  K T+              G      + + R+I    ++++L NG + 
Sbjct: 63  QELVYKQGQAGITKATVSVVFDNSHSSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLA 122

Query: 129 PKKDVAESIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVG 176
               V        + VNN    + Q R+ +   + P ++L   E+A G
Sbjct: 123 QPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPQEILSMLEEAAG 170