Miyakogusa Predicted Gene

Lj3g3v0824800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824800.1 tr|A9RY09|A9RY09_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,33.89,6e-19,DUF3411,Protein of unknown function DUF3411;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.41517.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g16260.1                                                       291   6e-79
Glyma12g01220.1                                                       259   2e-69
Glyma09g36110.1                                                       259   3e-69
Glyma11g09920.1                                                       220   1e-57
Glyma12g02260.1                                                       219   2e-57
Glyma18g02660.1                                                       106   3e-23
Glyma11g35750.1                                                       105   4e-23
Glyma18g41130.1                                                        54   2e-07
Glyma07g16640.1                                                        53   3e-07

>Glyma11g16260.1 
          Length = 393

 Score =  291 bits (744), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 140/163 (85%), Positives = 152/163 (93%)

Query: 100 MLVLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKFGGFKERLLGD 159
           M+ LAEAG+SLE+FP DLAAAVTAGRVPG IVRR FQLEESAV  WL+KFGGF+ERLL D
Sbjct: 112 MVALAEAGRSLESFPEDLAAAVTAGRVPGSIVRRLFQLEESAVLGWLLKFGGFRERLLAD 171

Query: 160 DLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPILS 219
           DLFL KL++EC V+IFTKAAAELERRKEKFTKEL+FVVANVVTGIVTGFVLVWFPAP +S
Sbjct: 172 DLFLAKLLIECVVIIFTKAAAELERRKEKFTKELNFVVANVVTGIVTGFVLVWFPAPTIS 231

Query: 220 LKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
           LKPPLAVSAGPIAKLFYGCP+NAFQVAL GTSYT+LQRIGAIV
Sbjct: 232 LKPPLAVSAGPIAKLFYGCPDNAFQVALPGTSYTLLQRIGAIV 274


>Glyma12g01220.1 
          Length = 372

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/164 (76%), Positives = 141/164 (85%)

Query: 99  AMLVLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKFGGFKERLLG 158
           A+LVLAEAG+ LE  PADLAAAV AGRVPG IV+R F+LE+SAVFRWL+ FGGF+ERLL 
Sbjct: 90  ALLVLAEAGRPLEKLPADLAAAVEAGRVPGSIVKRLFELEKSAVFRWLLNFGGFRERLLA 149

Query: 159 DDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPIL 218
           DDLFL K+ MEC V IFTK AAELE+RKE FTKELDFV A+VV  IV  F+LVW PAP +
Sbjct: 150 DDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTV 209

Query: 219 SLKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
           SL+PPLAVSAG IAK FYGCPENAFQVALAGTSY+++QRIGAIV
Sbjct: 210 SLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIV 253


>Glyma09g36110.1 
          Length = 376

 Score =  259 bits (661), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 124/164 (75%), Positives = 141/164 (85%)

Query: 99  AMLVLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKFGGFKERLLG 158
           A+LVLAEAG+ LE  PADLAAA+ AGRVPG IV+R F+LE+SAVFRWL+ FGGF+ERLL 
Sbjct: 94  ALLVLAEAGRPLEKLPADLAAAIGAGRVPGSIVKRLFELEKSAVFRWLLNFGGFRERLLA 153

Query: 159 DDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPIL 218
           DDLFL K+ MEC V IFTK AAELE+RKE FTKELDFV A+VV  IV  F+LVW PAP +
Sbjct: 154 DDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTV 213

Query: 219 SLKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
           SL+PPLAVSAG IAK FYGCPENAFQVALAGTSY+++QRIGAIV
Sbjct: 214 SLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIV 257


>Glyma11g09920.1 
          Length = 368

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 134/164 (81%)

Query: 99  AMLVLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKFGGFKERLLG 158
           A+LV+AEAG+SLE+ PADLAAA+ AG++P  +V R+ +LE+S  FRWL++F GF+ERLL 
Sbjct: 90  ALLVVAEAGRSLESVPADLAAAIKAGKIPASVVTRFLELEKSPFFRWLLQFAGFRERLLA 149

Query: 159 DDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPIL 218
           DDLFL K+ MEC V +FTK AAE E+RKE F  E++ V A+V   I+  F+LV+ PAP +
Sbjct: 150 DDLFLAKVAMECGVGVFTKTAAEYEKRKENFFNEIEIVFADVAMAIIADFMLVYLPAPTV 209

Query: 219 SLKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
           +L+PPLA++AGP+AK F+GCP+NAFQVAL+G SY+++QR+GAIV
Sbjct: 210 ALRPPLALTAGPVAKFFHGCPDNAFQVALSGASYSLIQRVGAIV 253


>Glyma12g02260.1 
          Length = 364

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 133/164 (81%)

Query: 99  AMLVLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKFGGFKERLLG 158
           A+LV+AEAG+SLE+ PADLAAA+  G++P  +V R+ +LE+S  FRWL++F GF+ERLL 
Sbjct: 86  ALLVVAEAGRSLESVPADLAAAIKDGKIPASVVSRFLELEKSPFFRWLLQFTGFRERLLA 145

Query: 159 DDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPIL 218
           DDLFL K+ MEC V +FTK AAE E+R+E F  EL+ V A+V   I+  F+LV+ PAP +
Sbjct: 146 DDLFLAKVAMECGVGVFTKTAAEYEKRRENFFNELEIVFADVAMAIIADFMLVYLPAPTV 205

Query: 219 SLKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
           +L+PPLA++AGPIAK F+GCP+NAFQVAL+G SY+++QR+GAIV
Sbjct: 206 ALRPPLALTAGPIAKFFHGCPDNAFQVALSGASYSLIQRVGAIV 249


>Glyma18g02660.1 
          Length = 747

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 10/169 (5%)

Query: 102 VLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLM-KFGGFKERLLGDD 160
           V+  AG+  +  P DL   +  G V   +++ +F LE+  +   L  +F GF+ERLL D 
Sbjct: 433 VMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADP 492

Query: 161 LFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPILS- 219
            FL +L +E  + I T   A+ E+RKE F +E+D+V+ + V G V  F  VW PAP LS 
Sbjct: 493 KFLHRLAIEEAISITTTLLAQYEKRKENFFQEIDYVITDTVRGSVVDFFTVWLPAPTLSF 552

Query: 220 ------LKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
                 +K P  +  G +  L    P+NAFQ   AG ++ +  RI ++V
Sbjct: 553 LSYADEMKAPDNI--GSLMGLLGSIPDNAFQKNPAGINWNLNHRIASVV 599


>Glyma11g35750.1 
          Length = 748

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 10/169 (5%)

Query: 102 VLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLM-KFGGFKERLLGDD 160
           V+  AG+  +  P DL   +  G V   +++ +F LE+  +   L  +F GF+ERLL D 
Sbjct: 434 VMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADP 493

Query: 161 LFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAPILS- 219
            FL +L +E  + I T   A+ E+RKE F +E+D+V+ + V G V  F  VW PAP LS 
Sbjct: 494 KFLHRLAIEEAISITTTLLAQYEKRKENFFQEIDYVITDTVRGSVVDFFTVWLPAPTLSF 553

Query: 220 ------LKPPLAVSAGPIAKLFYGCPENAFQVALAGTSYTILQRIGAIV 262
                 +K P  +  G +  L    P+NAFQ   AG ++ +  RI ++V
Sbjct: 554 LSYADEMKAPDNI--GSLMGLLGSIPDNAFQKNPAGINWNLNHRIASVV 600


>Glyma18g41130.1 
          Length = 443

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)

Query: 102 VLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKF-----GGFKERL 156
           V+ E        P D+  A  +  +  +++ RY  L+ S    W + F        + R+
Sbjct: 165 VMRETEARGATLPLDMIEAAKSVGIRKVLLLRYLDLQGSF---WPLGFFMKSCSMLRNRM 221

Query: 157 LGDDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAP 216
           L D  FL K+  E  +       AE+++R + F  E +  +A+++ G+V    LV   AP
Sbjct: 222 LADPAFLFKIGSEIVIDTCCATFAEIQKRGKDFWAEFELYLADLLVGLVVNVALVGMLAP 281

Query: 217 ILSLKPPLAVSA--GPIAKLFYGCPENAFQVALAGTSYTILQRIG 259
              L  P   S   G + K +   P + F+    G  +++ QR+G
Sbjct: 282 YARLGKPSISSGFLGRMQKAYAALPSSVFEAERPGCRFSVQQRLG 326


>Glyma07g16640.1 
          Length = 443

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)

Query: 102 VLAEAGKSLENFPADLAAAVTAGRVPGLIVRRYFQLEESAVFRWLMKF-----GGFKERL 156
           V+ E        P D+  A  +  +  +++ RY  L+ S    W + F        + R+
Sbjct: 165 VMRETEARGATLPLDMIEAAKSVGIRKVLLLRYLDLQGSF---WPLGFFMKSCSMLRNRM 221

Query: 157 LGDDLFLTKLIMECTVVIFTKAAAELERRKEKFTKELDFVVANVVTGIVTGFVLVWFPAP 216
           L D  FL K+  E  +       AE+++R + F  E +  +A+++ G+V    LV   AP
Sbjct: 222 LADPAFLFKIGSEIVIDTCCATFAEIQKRGKDFWAEFELYLADLLVGLVVNVALVGMLAP 281

Query: 217 ILSLKPPLAVSA--GPIAKLFYGCPENAFQVALAGTSYTILQRIG 259
              +  P   S   G + K +   P + F+    G  +++ QR+G
Sbjct: 282 YARIGKPSISSGFLGRMQKAYAALPSSVFEAERPGCRFSVQQRLG 326