Miyakogusa Predicted Gene

Lj3g3v0824610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824610.1 tr|B9MT90|B9MT90_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_739338 PE=4
SV=1,75.89,1.99965e-42,DnaJ,Heat shock protein DnaJ, N-terminal; no
description,Heat shock protein DnaJ, N-terminal; UNCHAR,CUFF.41496.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g20060.1                                                       153   5e-38
Glyma10g05710.1                                                       149   8e-37
Glyma05g16850.1                                                       134   3e-32
Glyma17g23760.1                                                       100   4e-22

>Glyma13g20060.1 
          Length = 110

 Score =  153 bits (386), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 83/110 (75%), Gaps = 3/110 (2%)

Query: 1   MATPLMXXXXXXXXXXXXXXXXXXWHNLRNLP---KKFYEGGFQATMTRREAALILGVRE 57
           MATPL+                  W   +  P   +KFYEGGFQATMTRREAALILGVRE
Sbjct: 1   MATPLVAGIAVAAAAYAGRYGIQAWQAFKARPPSMRKFYEGGFQATMTRREAALILGVRE 60

Query: 58  RTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEAKDMLLGKPKGGGSAF 107
           RTPTDKIKEAH+RVM+ANHPDAGGSHYLASKINEAKDMLLGK KGGGSAF
Sbjct: 61  RTPTDKIKEAHRRVMVANHPDAGGSHYLASKINEAKDMLLGKTKGGGSAF 110


>Glyma10g05710.1 
          Length = 110

 Score =  149 bits (375), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 76/110 (69%), Positives = 82/110 (74%), Gaps = 3/110 (2%)

Query: 1   MATPLMXXXXXXXXXXXXXXXXXXWHNLRNLP---KKFYEGGFQATMTRREAALILGVRE 57
           MATPL+                  W   +  P   +KFYEGGF ATMTRREAALILGVRE
Sbjct: 1   MATPLVAGIAVAAAAYAGRYGIQAWQAFKARPPSMRKFYEGGFPATMTRREAALILGVRE 60

Query: 58  RTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEAKDMLLGKPKGGGSAF 107
           RTPTDKIKEAH+RVM+ANHPDAGGSHYLASKINEAKDML+GK KGGGSAF
Sbjct: 61  RTPTDKIKEAHRRVMVANHPDAGGSHYLASKINEAKDMLIGKTKGGGSAF 110


>Glyma05g16850.1 
          Length = 112

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 78/112 (69%), Gaps = 5/112 (4%)

Query: 1   MATPLMXXXXXXXXXXXXXXXXXXWHNLRNLP-----KKFYEGGFQATMTRREAALILGV 55
           MATP +                  W   ++ P     +KFYEGGFQ+TMTRREAALILGV
Sbjct: 1   MATPFLAGLAVAAAALASRYGIQAWQAFKSRPPKPRLRKFYEGGFQSTMTRREAALILGV 60

Query: 56  RERTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEAKDMLLGKPKGGGSAF 107
           RE    DK+KEAH++VM+ANHPDAGGSHYLASKINEAKD++LGK +G GSAF
Sbjct: 61  RENATADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDVMLGKGRGSGSAF 112


>Glyma17g23760.1 
          Length = 107

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)

Query: 25  WHNLRNLP-----KKFYEGGFQATMTRREAALILGVRERTPTDKIKEAHKRVMIANHPDA 79
           W   +  P     +KF +GGFQ TMTRREAALILGVRE    DK+KEAH+RVM+ANH   
Sbjct: 24  WQAFKTQPPKPRLRKFCDGGFQPTMTRREAALILGVRENATADKVKEAHRRVMVANH--L 81

Query: 80  GGSHYLASKINEAKDMLLGKPKGGGSAF 107
           GGS  LASKIN+AK +++GK KG GSAF
Sbjct: 82  GGS--LASKINKAKKVMVGKGKGSGSAF 107