Miyakogusa Predicted Gene

Lj3g3v0823580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0823580.1 Non Chatacterized Hit- tr|B9SV78|B9SV78_RICCO
Putative uncharacterized protein OS=Ricinus communis G,36.96,2e-17,
,CUFF.41493.1
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g17710.1                                                       204   3e-53
Glyma11g16120.1                                                       187   5e-48

>Glyma12g17710.1 
          Length = 317

 Score =  204 bits (520), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 99/143 (69%), Positives = 119/143 (83%), Gaps = 2/143 (1%)

Query: 47  DDKARILSGKERIVHEGIKEMKSVGFWVCGVVLSCLYGDARPYMELRKIAGGFESSSVAT 106
           DD+ R+ SGKE IVHE +KEM+S+GFWVCGV+LSCLYGD +PYMELRKIAGGF+ S VAT
Sbjct: 167 DDEVRVFSGKEWIVHEAVKEMRSIGFWVCGVMLSCLYGDGKPYMELRKIAGGFDGSLVAT 226

Query: 107 LDFKISEQLMEKMPMFGEIQELNSFVAE-VAASDEVKRHEETTELQTKLHEFEKLLDGMS 165
           LDFKI+EQL+EK P+F EI+E+N+ V+  + ASDEV RH+   ELQTKL   EKL D +S
Sbjct: 227 LDFKINEQLIEKRPLFSEIKEVNNVVSNLLVASDEV-RHDAANELQTKLRVLEKLSDDIS 285

Query: 166 KEVDNLFADVMTQRSELINVFRF 188
           KEVDNLFA+VMTQRSELI+ FR 
Sbjct: 286 KEVDNLFANVMTQRSELIDGFRL 308


>Glyma11g16120.1 
          Length = 318

 Score =  187 bits (475), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)

Query: 46  DDDKARILSGKERIVHEGIKEMKSVGFWVCGVVLSCLYGDARPYMELRKIAGGFESSS-V 104
           DD+K    SGKE +VHE +KEM+S+GFWVCGV+LSCLYGD +PYMELRKIAGGF+  S V
Sbjct: 169 DDEKRVFFSGKEWMVHEAVKEMRSIGFWVCGVMLSCLYGDGKPYMELRKIAGGFDGGSLV 228

Query: 105 ATLDFKISEQLMEKMPMFGEIQELNSFVAE-VAASDEVKRHEETTELQTKLHEFEKLLDG 163
           ATLD KI EQLM++ P+F EI+E+N+ V+  + ASDEV RH+   ELQTKL   EKL D 
Sbjct: 229 ATLDSKIGEQLMKQRPIFSEIKEVNNAVSNLLVASDEV-RHDAAKELQTKLSVLEKLSDD 287

Query: 164 MSKEVDNLFADVMTQRSELINVFRF 188
           + KEVDNLFA+VMTQRSELI+ FR 
Sbjct: 288 IRKEVDNLFANVMTQRSELIDGFRL 312