Miyakogusa Predicted Gene
- Lj3g3v0819890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0819890.1 Non Chatacterized Hit- tr|A5ATG0|A5ATG0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,31.53,1e-18,
,gene.g46138.t1.1
(315 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g20890.1 362 e-100
Glyma11g20890.2 346 2e-95
Glyma04g26020.1 232 3e-61
Glyma03g28860.1 87 3e-17
Glyma19g31570.1 84 2e-16
>Glyma11g20890.1
Length = 300
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 237/324 (73%), Gaps = 39/324 (12%)
Query: 1 MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
+YCHSNV +WNDSAAEEAFQNAK YWA+IN+LPCDISLPDP+++I QIDW+PYIDP+ I
Sbjct: 3 VYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDLI 62
Query: 61 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKE---WNQEDYHD 117
KE+D AFF++PDEEQ +A KNKRTKTS++DE+ W+ T TPLS LEN E WNQ
Sbjct: 63 KEIDGAFFIVPDEEQENAMKNKRTKTSLNDENPWECTDTPLSTALENNEVQGWNQ----G 118
Query: 118 DSGNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGR 177
+SG++DNTDNPWECS+T C NGGLTDN+W+G +SWGWNE +
Sbjct: 119 NSGDVDNTDNPWECSIT--------------CG----NGGLTDNAWEGGPVKSWGWNEEK 160
Query: 178 DHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQNVTPVNTGW 236
H+NQC+DWNSG SQ DKGWGK SSW QQQSN+ A+F N SW CKSSQQNVTP+ TGW
Sbjct: 161 GHNNQCKDWNSGNSQ-DKGWGKARDSSWCQQQSNNLANFGNSSWHCKSSQQNVTPMKTGW 219
Query: 237 GNRGANVSGWKQQENTDLSRGLQFKRNNGG-------CSAWNQSYQRREGSFRHNSGYNS 289
NRGANVSGWKQQE +SR RN GG + WNQ Q REGS RH GYN
Sbjct: 220 RNRGANVSGWKQQEKAGVSR-----RNYGGGWTAQNKGNQWNQGNQWREGSHRHTLGYNG 274
Query: 290 SQFQRDDRETGNYWRRDRSNKRDF 313
SQFQRD +TG+YW ++RS KRDF
Sbjct: 275 SQFQRDGCQTGHYWGKERSKKRDF 298
>Glyma11g20890.2
Length = 290
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 230/324 (70%), Gaps = 49/324 (15%)
Query: 1 MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
+YCHSNV +WNDSAAEEAFQNAK YWA+IN+LPCDISLPDP+++I QIDW+PYIDP+ I
Sbjct: 3 VYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDLI 62
Query: 61 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKE---WNQEDYHD 117
KE+D AFF++PDEEQ +A KNKRTKTS++DE+ W+ T TPLS LEN E WNQ
Sbjct: 63 KEIDGAFFIVPDEEQENAMKNKRTKTSLNDENPWECTDTPLSTALENNEVQGWNQ----G 118
Query: 118 DSGNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGR 177
+SG++DNTDNPWECS+T C NGGLTDN+W+G +SWGWNE +
Sbjct: 119 NSGDVDNTDNPWECSIT--------------CG----NGGLTDNAWEGGPVKSWGWNEEK 160
Query: 178 DHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQNVTPVNTGW 236
H+NQC+DWNSG SQ DKGWGK SSW QQQSN+ A+F N SW CKSSQQNVTP+ TGW
Sbjct: 161 GHNNQCKDWNSGNSQ-DKGWGKARDSSWCQQQSNNLANFGNSSWHCKSSQQNVTPMKTGW 219
Query: 237 GNRGANVSGWKQQENTDLSRGLQFKRNNGG-------CSAWNQSYQRREGSFRHNSGYNS 289
NRGANVSGWKQQE +SR RN GG + WNQ Q REGS RH GYN
Sbjct: 220 RNRGANVSGWKQQEKAGVSR-----RNYGGGWTAQNKGNQWNQGNQWREGSHRHTLGYNG 274
Query: 290 SQFQRDDRETGNYWRRDRSNKRDF 313
SQFQRD +RS KRDF
Sbjct: 275 SQFQRD----------ERSKKRDF 288
>Glyma04g26020.1
Length = 195
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 152/229 (66%), Gaps = 50/229 (21%)
Query: 1 MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
+YCHSNV +WNDSAAEEA QNAK YWA+IN+LPCDISLPDP+++ +QIDWNPYIDP+ I
Sbjct: 3 VYCHSNVFDWNDSAAEEALQNAKNHYWAKINSLPCDISLPDPDTYNDQIDWNPYIDPDMI 62
Query: 61 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDSG 120
KE+DKAFF +PDEEQ A KNKRTKTS +SG
Sbjct: 63 KEIDKAFFTVPDEEQETAIKNKRTKTS-----------------------------GNSG 93
Query: 121 NMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGRDHD 180
++DNTDNPWECSVT NG LTDN+W+G +SWGWNEGRDH
Sbjct: 94 DVDNTDNPWECSVTH------------------GNGRLTDNAWEGGPVKSWGWNEGRDH- 134
Query: 181 NQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQN 228
NQC+DWNS Q DKGWGK SSW QQQSN+ A+F N SW CKSSQQN
Sbjct: 135 NQCKDWNSENLQ-DKGWGKARDSSWCQQQSNNLANFGNSSWQCKSSQQN 182
>Glyma03g28860.1
Length = 346
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 1 MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
M+ +V NW+DSA +EAF NAK RYWA IN +PC+IS PDP FI+++DWN +DP+ I
Sbjct: 62 MHLFEHVVNWDDSAGKEAFDNAKTRYWAEINGVPCNISPPDPNIFIDEVDWNATVDPQLI 121
Query: 61 KELDKAFFVLPDEE 74
+++ +P+EE
Sbjct: 122 LDVETELAKVPNEE 135
>Glyma19g31570.1
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 27/190 (14%)
Query: 1 MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
M+ +V NW+DSA +EAF NAK RYWA IN +PC+ISLPDP + +++DWN +DP+ I
Sbjct: 62 MHLFEHVVNWDDSAGKEAFDNAKMRYWAEINGVPCNISLPDPNIYTDEVDWNAIVDPQLI 121
Query: 61 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDSG 120
+++ +P+EE +N + P + W+ +DY ++
Sbjct: 122 LDMEMELAKVPNEE----LRNDHEIVMIGGALFLNEQQLPCTG------WD-DDYAAEAP 170
Query: 121 NMDNTDNPWECSVTRQNGGLTGNDNP-----WECSVTPQNGGLTDNSWKGDHAQ------ 169
N ++ W ++ NG +G N E P D + +HA+
Sbjct: 171 NPNSAVQGWAANLQANNGVESGQQNHAPAEHVEEHFAPAEPAKEDFA-PAEHAKGYEWQD 229
Query: 170 ----SWGWNE 175
SWGWN+
Sbjct: 230 WRNDSWGWNQ 239