Miyakogusa Predicted Gene

Lj3g3v0808820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0808820.1 Non Chatacterized Hit- tr|I1R3V5|I1R3V5_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,42.39,1e-17,seg,NULL,
NODE_61267_length_1879_cov_14.011176.path1.1
         (379 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g20890.1                                                       362   e-100
Glyma11g20890.2                                                       346   3e-95
Glyma04g26020.1                                                       232   6e-61
Glyma03g28860.1                                                       128   1e-29
Glyma19g31570.1                                                       126   3e-29

>Glyma11g20890.1 
          Length = 300

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/324 (62%), Positives = 237/324 (73%), Gaps = 39/324 (12%)

Query: 65  MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 124
           +YCHSNV +WNDSAAEEAFQNAK  YWA+IN+LPCDISLPDP+++I QIDW+PYIDP+ I
Sbjct: 3   VYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDLI 62

Query: 125 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKE---WNQEDYHD 181
           KE+D AFF++PDEEQ +A KNKRTKTS++DE+ W+ T TPLS  LEN E   WNQ     
Sbjct: 63  KEIDGAFFIVPDEEQENAMKNKRTKTSLNDENPWECTDTPLSTALENNEVQGWNQ----G 118

Query: 182 DSGNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGR 241
           +SG++DNTDNPWECS+T              C     NGGLTDN+W+G   +SWGWNE +
Sbjct: 119 NSGDVDNTDNPWECSIT--------------CG----NGGLTDNAWEGGPVKSWGWNEEK 160

Query: 242 DHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQNVTPVNTGW 300
            H+NQC+DWNSG SQ DKGWGK   SSW QQQSN+ A+F N SW CKSSQQNVTP+ TGW
Sbjct: 161 GHNNQCKDWNSGNSQ-DKGWGKARDSSWCQQQSNNLANFGNSSWHCKSSQQNVTPMKTGW 219

Query: 301 GNRGANVSGWKQQENTDLSRGLQFKRNNGG-------CSAWNQSYQRREGSFRHNSGYNS 353
            NRGANVSGWKQQE   +SR     RN GG        + WNQ  Q REGS RH  GYN 
Sbjct: 220 RNRGANVSGWKQQEKAGVSR-----RNYGGGWTAQNKGNQWNQGNQWREGSHRHTLGYNG 274

Query: 354 SQFQRDDRETGNYWRRDRSNKRDF 377
           SQFQRD  +TG+YW ++RS KRDF
Sbjct: 275 SQFQRDGCQTGHYWGKERSKKRDF 298


>Glyma11g20890.2 
          Length = 290

 Score =  346 bits (887), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 197/324 (60%), Positives = 230/324 (70%), Gaps = 49/324 (15%)

Query: 65  MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 124
           +YCHSNV +WNDSAAEEAFQNAK  YWA+IN+LPCDISLPDP+++I QIDW+PYIDP+ I
Sbjct: 3   VYCHSNVFDWNDSAAEEAFQNAKSHYWAKINSLPCDISLPDPDTYINQIDWSPYIDPDLI 62

Query: 125 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKE---WNQEDYHD 181
           KE+D AFF++PDEEQ +A KNKRTKTS++DE+ W+ T TPLS  LEN E   WNQ     
Sbjct: 63  KEIDGAFFIVPDEEQENAMKNKRTKTSLNDENPWECTDTPLSTALENNEVQGWNQ----G 118

Query: 182 DSGNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGR 241
           +SG++DNTDNPWECS+T              C     NGGLTDN+W+G   +SWGWNE +
Sbjct: 119 NSGDVDNTDNPWECSIT--------------CG----NGGLTDNAWEGGPVKSWGWNEEK 160

Query: 242 DHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQNVTPVNTGW 300
            H+NQC+DWNSG SQ DKGWGK   SSW QQQSN+ A+F N SW CKSSQQNVTP+ TGW
Sbjct: 161 GHNNQCKDWNSGNSQ-DKGWGKARDSSWCQQQSNNLANFGNSSWHCKSSQQNVTPMKTGW 219

Query: 301 GNRGANVSGWKQQENTDLSRGLQFKRNNGG-------CSAWNQSYQRREGSFRHNSGYNS 353
            NRGANVSGWKQQE   +SR     RN GG        + WNQ  Q REGS RH  GYN 
Sbjct: 220 RNRGANVSGWKQQEKAGVSR-----RNYGGGWTAQNKGNQWNQGNQWREGSHRHTLGYNG 274

Query: 354 SQFQRDDRETGNYWRRDRSNKRDF 377
           SQFQRD          +RS KRDF
Sbjct: 275 SQFQRD----------ERSKKRDF 288


>Glyma04g26020.1 
          Length = 195

 Score =  232 bits (591), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/229 (57%), Positives = 152/229 (66%), Gaps = 50/229 (21%)

Query: 65  MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 124
           +YCHSNV +WNDSAAEEA QNAK  YWA+IN+LPCDISLPDP+++ +QIDWNPYIDP+ I
Sbjct: 3   VYCHSNVFDWNDSAAEEALQNAKNHYWAKINSLPCDISLPDPDTYNDQIDWNPYIDPDMI 62

Query: 125 KELDKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDSG 184
           KE+DKAFF +PDEEQ  A KNKRTKTS                              +SG
Sbjct: 63  KEIDKAFFTVPDEEQETAIKNKRTKTS-----------------------------GNSG 93

Query: 185 NMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEGRDHD 244
           ++DNTDNPWECSVT                    NG LTDN+W+G   +SWGWNEGRDH 
Sbjct: 94  DVDNTDNPWECSVTH------------------GNGRLTDNAWEGGPVKSWGWNEGRDH- 134

Query: 245 NQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSN-SWGCKSSQQN 292
           NQC+DWNS   Q DKGWGK   SSW QQQSN+ A+F N SW CKSSQQN
Sbjct: 135 NQCKDWNSENLQ-DKGWGKARDSSWCQQQSNNLANFGNSSWQCKSSQQN 182


>Glyma03g28860.1 
          Length = 346

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 80/114 (70%)

Query: 25  YDINAPLPEFRQDGIPLWEKKYCTKIGSVPWQKIVDSKKSMYCHSNVHNWNDSAAEEAFQ 84
           Y+   PL       +P WE+K+CT IGSVPW+K+V+SKK M+   +V NW+DSA +EAF 
Sbjct: 22  YNRKPPLGNKWHSTVPAWERKFCTSIGSVPWRKLVESKKYMHLFEHVVNWDDSAGKEAFD 81

Query: 85  NAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQIKELDKAFFVLPDEE 138
           NAK RYWA IN +PC+IS PDP  FI+++DWN  +DP+ I +++     +P+EE
Sbjct: 82  NAKTRYWAEINGVPCNISPPDPNIFIDEVDWNATVDPQLILDVETELAKVPNEE 135


>Glyma19g31570.1 
          Length = 326

 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 27/230 (11%)

Query: 25  YDINAPLPEFRQDGIPLWEKKYCTKIGSVPWQKIVDSKKSMYCHSNVHNWNDSAAEEAFQ 84
           Y+   PL +     +P WE+K+CT IGSVPW+K+V+SKK M+   +V NW+DSA +EAF 
Sbjct: 22  YNRKPPLGDKWHSTVPAWERKFCTSIGSVPWRKLVESKKYMHLFEHVVNWDDSAGKEAFD 81

Query: 85  NAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQIKELDKAFFVLPDEEQGDATK 144
           NAK RYWA IN +PC+ISLPDP  + +++DWN  +DP+ I +++     +P+EE     +
Sbjct: 82  NAKMRYWAEINGVPCNISLPDPNIYTDEVDWNAIVDPQLILDMEMELAKVPNEE----LR 137

Query: 145 NKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDSGNMDNTDNPWECSVTRQNGGL 204
           N      +           P +       W+ +DY  ++ N ++    W  ++   NG  
Sbjct: 138 NDHEIVMIGGALFLNEQQLPCTG------WD-DDYAAEAPNPNSAVQGWAANLQANNGVE 190

Query: 205 TGNDNP-----WECSVTPQNGGLTDNSWKGDHAQ----------SWGWNE 239
           +G  N       E    P      D +   +HA+          SWGWN+
Sbjct: 191 SGQQNHAPAEHVEEHFAPAEPAKEDFA-PAEHAKGYEWQDWRNDSWGWNQ 239