Miyakogusa Predicted Gene
- Lj3g3v0807810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0807810.1 CUFF.41471.1
(228 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g16260.1 401 e-112
Glyma06g47430.1 401 e-112
Glyma04g16260.2 204 4e-53
Glyma02g07250.1 64 1e-10
Glyma16g26210.1 64 2e-10
Glyma06g36850.1 61 1e-09
>Glyma04g16260.1
Length = 477
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 202/228 (88%)
Query: 1 MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
MR+KVVVTDSLFSMDGDYAPMVELA+LRKKH FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 250 MRKKVVVTDSLFSMDGDYAPMVELADLRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCE 309
Query: 61 KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
KDVD+CIGTLSKAAGCHGGFIACSK WKLLIQSRGRSFIFS K
Sbjct: 310 KDVDICIGTLSKAAGCHGGFIACSKKWKLLIQSRGRSFIFSTAAPVPVAAAAHAAVKVAK 369
Query: 121 LETWRRKAIWNRVKDFHSLTGIPVTSPIISLIVGSEDKALQASRFLLQSGFHVTAIRPPT 180
ETWRR+AIWNRVKDFH LTGIPVTSPIISLIVG+EDKALQASR LLQSGFHVTAIRPPT
Sbjct: 370 HETWRREAIWNRVKDFHLLTGIPVTSPIISLIVGTEDKALQASRHLLQSGFHVTAIRPPT 429
Query: 181 VPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIYSSNGYARL 228
VPPNSCRLRV LSAVHTR+DLENL+AALSRCINFQDTRIY SN YARL
Sbjct: 430 VPPNSCRLRVALSAVHTREDLENLAAALSRCINFQDTRIYDSNAYARL 477
>Glyma06g47430.1
Length = 477
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 201/228 (88%)
Query: 1 MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
MR+KVVVTDSLFSMDGDYAPMVELA+LRK+H FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 250 MRKKVVVTDSLFSMDGDYAPMVELADLRKRHGFLLVIDDAHGTFVCGKNGGGVAEEFNCE 309
Query: 61 KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
KDVD+CIGTLSKAAGCHGGFIACSK WKLLIQSRGRSFIFS K
Sbjct: 310 KDVDICIGTLSKAAGCHGGFIACSKKWKLLIQSRGRSFIFSTAALVPVAAAGHAAIKVAK 369
Query: 121 LETWRRKAIWNRVKDFHSLTGIPVTSPIISLIVGSEDKALQASRFLLQSGFHVTAIRPPT 180
LE WRR+AIWNRVKDFH LTGIPVTS IISL+VGSEDKALQASR LLQSGFHVTAIRPPT
Sbjct: 370 LEKWRREAIWNRVKDFHLLTGIPVTSHIISLVVGSEDKALQASRHLLQSGFHVTAIRPPT 429
Query: 181 VPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIYSSNGYARL 228
VPPNSCRLRV LSAVHTR+DLENL+AALSRCINFQDTRIY SN YARL
Sbjct: 430 VPPNSCRLRVALSAVHTREDLENLAAALSRCINFQDTRIYDSNAYARL 477
>Glyma04g16260.2
Length = 363
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/101 (94%), Positives = 99/101 (98%)
Query: 1 MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
MR+KVVVTDSLFSMDGDYAPMVELA+LRKKH FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 250 MRKKVVVTDSLFSMDGDYAPMVELADLRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCE 309
Query: 61 KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFS 101
KDVD+CIGTLSKAAGCHGGFIACSK WKLLIQSRGRSFIFS
Sbjct: 310 KDVDICIGTLSKAAGCHGGFIACSKKWKLLIQSRGRSFIFS 350
>Glyma02g07250.1
Length = 489
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 2 RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE- 60
++ +VV + ++SM+G+ + E+ + KK+ +D+AH G++G GV E +
Sbjct: 240 KKIMVVVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDT 299
Query: 61 KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
DVD+ +GT +K+ G GG+IA SK ++ + +++
Sbjct: 300 ADVDIMMGTFTKSFGSCGGYIAGSKDLIQHLKYACPAHLYATSISPPAAQQIISSIRVIL 359
Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
KL R + N + G V SP++ +++ + K SR
Sbjct: 360 GEDGSNRGAQKLAQIRENS--NFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417
Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDLENLSAALSR 210
L+ V + P P R R+ +SA H+R+DL +SR
Sbjct: 418 CLKQNVAVVTVAFPATPLLLARARICISAAHSREDLIKALQVISR 462
>Glyma16g26210.1
Length = 490
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 18/225 (8%)
Query: 2 RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE- 60
++ +V+ + ++SM+G+ + E+ + KK+ +D+AH G+ G GV E +
Sbjct: 240 KKIMVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299
Query: 61 KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
DVD+ +GT +K+ G GG+IA SK ++ + +++
Sbjct: 300 ADVDIMMGTFTKSFGSCGGYIAGSKDLIQHLKYTCPAHLYATSISPPAAQQIISSIRVIL 359
Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
KL R + N + G V SP++ +++ + K SR
Sbjct: 360 GEDGSNRGAQKLAQIRENS--NFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417
Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDLENLSAALSR 210
L+ + + P P R R+ +SA H+R+DL +SR
Sbjct: 418 CLKQNVAIVTVAFPATPLLLARARICISAAHSREDLIKALQVISR 462
>Glyma06g36850.1
Length = 34
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 29/33 (87%)
Query: 120 KLETWRRKAIWNRVKDFHSLTGIPVTSPIISLI 152
K ETWRR+AIWNRVKDFH LTGIPVTS IIS I
Sbjct: 2 KHETWRREAIWNRVKDFHLLTGIPVTSHIISKI 34