Miyakogusa Predicted Gene
- Lj3g3v0797530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0797530.1 tr|G7K2Z2|G7K2Z2_MEDTR Protein argonaute 4A
OS=Medicago truncatula GN=MTR_5g087890 PE=4
SV=1,54.44,2e-19,PAZ,Argonaute/Dicer protein, PAZ; SUBFAMILY NOT
NAMED,NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR,CUFF.41415.1
(95 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g47230.1 120 3e-28
Glyma02g44260.1 107 4e-24
Glyma20g12070.1 106 5e-24
Glyma20g12070.2 106 6e-24
Glyma14g04510.1 102 9e-23
Glyma09g22240.1 101 2e-22
Glyma13g26240.1 94 3e-20
Glyma15g37170.1 90 5e-19
>Glyma06g47230.1
Length = 879
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 1 MLKNLRVKANNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIEL 60
MLKNLR++AN +E+KI GLS+ CR Q F LR K NGEVQ EITV+DYF K I L
Sbjct: 270 MLKNLRIRANGVEFKISGLSDNTCRNQKFLLRQ-KGTNGEVQEREITVHDYFTRQKLIGL 328
Query: 61 RYSADMPCINVGKPKRPSYFPVEVTKQTT 89
YSADMPCINVGKPKRPSYFP+E+ + +
Sbjct: 329 NYSADMPCINVGKPKRPSYFPIELCEMVS 357
>Glyma02g44260.1
Length = 906
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 67/86 (77%), Gaps = 6/86 (6%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSL-RHGKDANGEVQSSEITVYDYFKHNKKI 58
LKNLR+KA+ N E+KI G+SE PC+ QTF+L R G D +V E+TVYDYF + +KI
Sbjct: 304 LKNLRIKASPSNQEFKITGISEFPCKDQTFTLKRKGGD---DVAEEEVTVYDYFVNIRKI 360
Query: 59 ELRYSADMPCINVGKPKRPSYFPVEV 84
+LRYS D+PCINVGKPKRP+Y P+E+
Sbjct: 361 DLRYSGDLPCINVGKPKRPTYIPLEL 386
>Glyma20g12070.1
Length = 976
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+K + N E+KI GLSE PCR QTF+L+ +GE + EITVYDYF +KI+
Sbjct: 310 LKNLRIKTSPSNQEFKISGLSELPCREQTFTLKGKGGGDGEDGNEEITVYDYFVKVRKID 369
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
LRYSAD+PCINVGKPKRP++FP+EV
Sbjct: 370 LRYSADLPCINVGKPKRPTFFPIEV 394
>Glyma20g12070.2
Length = 915
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+K + N E+KI GLSE PCR QTF+L+ +GE + EITVYDYF +KI+
Sbjct: 310 LKNLRIKTSPSNQEFKISGLSELPCREQTFTLKGKGGGDGEDGNEEITVYDYFVKVRKID 369
Query: 60 LRYSADMPCINVGKPKRPSYFPVEVTK 86
LRYSAD+PCINVGKPKRP++FP+EV +
Sbjct: 370 LRYSADLPCINVGKPKRPTFFPIEVCE 396
>Glyma14g04510.1
Length = 906
Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 6/86 (6%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRH-GKDANGEVQSSEITVYDYFKHNKKI 58
LKNLR+K++ N E+KI GLSE PC+ Q F+L+ G D + E E+TVYDYF + +KI
Sbjct: 304 LKNLRIKSSPSNQEFKITGLSELPCKDQMFTLKKKGGDDDTE---EEVTVYDYFVNIRKI 360
Query: 59 ELRYSADMPCINVGKPKRPSYFPVEV 84
+LRYS D+PCINVGKPKRP+Y P+E+
Sbjct: 361 DLRYSGDLPCINVGKPKRPTYIPLEL 386
>Glyma09g22240.1
Length = 87
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 6/85 (7%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRH-GKDANGEVQSSEITVYDYFKHNKKI 58
LKNLR+K++ N E+KI GLSE PC+ Q F+L+ G D + E E+TVYDYF + +KI
Sbjct: 6 LKNLRIKSSPSNQEFKITGLSELPCKDQMFTLKKKGGDDDTE---EEVTVYDYFVNIRKI 62
Query: 59 ELRYSADMPCINVGKPKRPSYFPVE 83
+LRYS D+PCINVGKPKRP+Y P+E
Sbjct: 63 DLRYSGDLPCINVGKPKRPTYIPLE 87
>Glyma13g26240.1
Length = 913
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Query: 1 MLKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLR-HGKDANGEVQSSEITVYDYFKHNKK 57
MLKNLRV+A +N E+KI GLSEKPC Q FS++ D N Q+ +ITVY+YF +
Sbjct: 310 MLKNLRVQATHHNQEFKISGLSEKPCIQQLFSMKVKNDDNNSRGQTVDITVYEYFAKHCG 369
Query: 58 IELRYSADMPCINVGKPKRPSYFPVEV 84
IEL SA +PC++VGKPKRP Y P+E+
Sbjct: 370 IELTSSAYLPCLDVGKPKRPVYLPLEL 396
>Glyma15g37170.1
Length = 779
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 1 MLKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLR-HGKDANGEVQSSEITVYDYFKHNKK 57
MLKNLRV++ +N E+KI GLSEKPC Q F+++ D N E Q+ +ITVY+YF
Sbjct: 232 MLKNLRVQSTHHNQEFKISGLSEKPCIQQLFNMKVKNDDDNSEGQTVDITVYEYFAKRCG 291
Query: 58 IELRYSADMPCINVGKPKRPSYFPVEV 84
IEL SA +PC++VGKPK P Y P+E+
Sbjct: 292 IELTSSAYLPCLDVGKPKWPIYLPLEL 318