Miyakogusa Predicted Gene

Lj3g3v0766060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0766060.1 Non Chatacterized Hit- tr|I0Z1S1|I0Z1S1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,29.81,3e-18,Transglut_core2,NULL; seg,NULL,CUFF.41376.1
         (366 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g21670.1                                                       462   e-130
Glyma04g17950.1                                                       220   2e-57
Glyma04g17940.1                                                        78   1e-14

>Glyma11g21670.1 
          Length = 340

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/302 (76%), Positives = 248/302 (82%), Gaps = 4/302 (1%)

Query: 32  TRVMCCG-GSNS---QPAATDYKFVLHDALDSSGIDTTHAREARVEFCSQIQKFTGIEKQ 87
           +RV+ C  GSNS   +  ATD KFVLHDAL  SGI+TTHAREAR  FCSQI++FT IEK 
Sbjct: 30  SRVVACHVGSNSNVQKHVATDLKFVLHDALHDSGINTTHAREAREHFCSQIRRFTDIEKG 89

Query: 88  TSICINRSVDLGRTALYIAAEXXXXXXXXXXXXXXXAFIVRLDDLSMDYCPHYSPKYDSS 147
           TSICINR VDLGRTALYIAAE                FI RLDDLSMDYCPHYSPKYDSS
Sbjct: 90  TSICINRCVDLGRTALYIAAEDDSLVSHSSVPLPVDDFITRLDDLSMDYCPHYSPKYDSS 149

Query: 148 PEKFLESIERFLYVHKGFKRTDANLLEPRSLYLHSVLTHRSGSAAMLSLIYSEILKMLRL 207
           PEKFLESIERFLY+HKGF+R +AN+LEPR+LYLHSVLTHRSGSAAMLSLIYSE+LKMLRL
Sbjct: 150 PEKFLESIERFLYIHKGFRRANANVLEPRALYLHSVLTHRSGSAAMLSLIYSEVLKMLRL 209

Query: 208 WGLLYFDAEIFFPHDFLTLPKGYNKQKSKESDQAHIMTSGNLLVEILNNLKHAFWPFQHD 267
           W LL+FDAEIFFP D LTLP GY+KQKSKESDQAHIMTSGNLLVEILN+LKHAFWPFQHD
Sbjct: 210 WSLLHFDAEIFFPRDALTLPTGYHKQKSKESDQAHIMTSGNLLVEILNDLKHAFWPFQHD 269

Query: 268 YTKTLFLRAAHAADCVDRSAFVGEXXXXXXXXXXXXHRLDRGVWTNACFGDMRRSLSACE 327
           +TKTLFLRAA AA+CVDRS FVGE            HRLDRGVWT+  FGDMRRSLSACE
Sbjct: 270 HTKTLFLRAATAANCVDRSDFVGESGSQIALAKAAQHRLDRGVWTSVRFGDMRRSLSACE 329

Query: 328 RL 329
           RL
Sbjct: 330 RL 331


>Glyma04g17950.1 
          Length = 187

 Score =  220 bits (561), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 108/142 (76%), Positives = 117/142 (82%)

Query: 65  THAREARVEFCSQIQKFTGIEKQTSICINRSVDLGRTALYIAAEXXXXXXXXXXXXXXXA 124
           +H  EAR +FCSQI +FT IEK+TSICINR VDLGRTALYIAAE                
Sbjct: 35  SHYLEAREQFCSQIGRFTDIEKETSICINRCVDLGRTALYIAAEDDSLVSHSSVPLPVDD 94

Query: 125 FIVRLDDLSMDYCPHYSPKYDSSPEKFLESIERFLYVHKGFKRTDANLLEPRSLYLHSVL 184
           FI RLDDLSMDYCPHYSP+YDSSPEKFLESIERFLY+HKGF+R +AN LEPR+LYLHSVL
Sbjct: 95  FITRLDDLSMDYCPHYSPEYDSSPEKFLESIERFLYIHKGFRRANANALEPRALYLHSVL 154

Query: 185 THRSGSAAMLSLIYSEILKMLR 206
           THRSGSAAMLSLIYSEILKMLR
Sbjct: 155 THRSGSAAMLSLIYSEILKMLR 176


>Glyma04g17940.1 
          Length = 96

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 38/42 (90%)

Query: 325 ACERLILLTNDANELRDYSILLYHCGLYEQSFQYLKKYRELK 366
           ACERLILL NDANE RDYSILLYHCGLYEQS +YL KYR+LK
Sbjct: 1   ACERLILLKNDANEFRDYSILLYHCGLYEQSLEYLTKYRDLK 42