Miyakogusa Predicted Gene
- Lj3g3v0719960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0719960.1 Non Chatacterized Hit- tr|I1JWN8|I1JWN8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,55.71,1e-18,DUF1675,Protein of unknown function DUF1675;
seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; F,CUFF.41212.1
(369 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g20380.1 290 2e-78
Glyma16g12800.1 277 1e-74
Glyma06g22210.2 102 6e-22
Glyma06g22210.3 102 8e-22
Glyma06g22210.1 102 8e-22
Glyma02g13120.1 102 1e-21
Glyma18g50240.1 100 2e-21
Glyma08g27010.1 100 2e-21
Glyma04g32390.1 100 3e-21
Glyma01g07390.1 99 1e-20
Glyma01g34820.1 78 1e-14
Glyma09g32660.3 75 1e-13
Glyma09g32660.1 75 1e-13
Glyma05g00350.1 72 1e-12
Glyma08g03960.1 66 6e-11
Glyma17g08690.1 64 3e-10
Glyma09g32660.2 62 7e-10
>Glyma03g20380.1
Length = 354
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 212/387 (54%), Positives = 244/387 (63%), Gaps = 51/387 (13%)
Query: 1 MVEVEEIELDLGLSIGGTFRKPIDN---PNSKPVLFDLDPRYDHRVDSAHAKPVLRE--A 55
MVEVEEIELDL LSIGG+F K P+S+ + + D R RV +P +
Sbjct: 1 MVEVEEIELDLALSIGGSFGKHTVEKPAPDSEARVSNSDSRDGMRVV---VEPSDKHDIQ 57
Query: 56 ALRRMEEVKKKLEQKR-GVGE-SEPECEPACKKGKTTGFLDGGVTVSW---TTPFCVQQQ 110
ALRRME KKK EQKR V E SEPE + K+ KT GV+ +W TTPF + Q
Sbjct: 58 ALRRME-AKKKTEQKRERVREPSEPELKRDFKREKTE--YGNGVSGAWNATTTPFDLHQF 114
Query: 111 PYAATVQYVPLSNGLALPCWVANEK---NXXXXXXXXXXXXXXAKSNGSSRCSSSAVSDY 167
P TVQY+PL+NG LPCWV EK A+SNGSSRCSSS VSDY
Sbjct: 115 P---TVQYLPLNNGSPLPCWVGGEKIVGAGVDGVNGGRGGNIKAQSNGSSRCSSSVVSDY 171
Query: 168 RCSSREDGGSTDSHSHSANSLAEPTQLNSSKEA-NIRNQPEES---DSSPPVKSQQYGNN 223
+ SS EDGGSTDSHSHS +SLAEPTQLN+SKE +I QPEES SS P+ + GNN
Sbjct: 172 QSSSGEDGGSTDSHSHSVHSLAEPTQLNTSKETISIGTQPEESVVSASSHPIMRPKQGNN 231
Query: 224 VQEEKQSVRQTQSNVVTRPEPVKLREENAENRKTLSMPNSKPLSNENSSNGTLKESKDEI 283
+ T E + +E + L + + KPLSNEN + K EI
Sbjct: 232 -------------TITTIQEMKHIAKEKTQEPIILPIIDLKPLSNENIT-------KVEI 271
Query: 284 LGKPPLPKPLSQ-ASSLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSP 342
+GK PKPLSQ +SSLPQMPYV TKG+ NGRTVNGFLYRYT SEVSIVCVCHGSTFSP
Sbjct: 272 MGK--TPKPLSQTSSSLPQMPYVFTKGD--NGRTVNGFLYRYTKSEVSIVCVCHGSTFSP 327
Query: 343 AEFVQHAGGTDITHPLKHITVIPSAFG 369
AEFVQHAGGTD THPL+HITVIPSAFG
Sbjct: 328 AEFVQHAGGTDTTHPLRHITVIPSAFG 354
>Glyma16g12800.1
Length = 385
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 201/380 (52%), Positives = 236/380 (62%), Gaps = 47/380 (12%)
Query: 1 MVEVEEIELDLGLSIGGTFRKPIDN---PNSKPVLFDLDPRYDHRVDSAHAKPVLREAAL 57
MVEVEEIELDL LSIGG+F K P+S+ + + D R RV + A
Sbjct: 1 MVEVEEIELDLALSIGGSFGKYTVEKPAPDSEARVSNSDSRDGMRV-VMEPREKREIQAF 59
Query: 58 RRMEEVKKKLEQKRGVGESEPECEPACKKGKTTGFLDGGVTVSWT----TPFCVQQQPYA 113
RRME +KK E+ R E E + ++ G GV+ SWT TP+ + Q
Sbjct: 60 RRME-ARKKRERLREPSEPESQLRDFKREKTECG---NGVSGSWTAATTTPYRMHQ---F 112
Query: 114 ATVQYVPLSNGLALPCWVANEKNXXXXXXXXXXX---XXXAKSNGSSRCSSSAVSDYRCS 170
ATVQY+PL+NG LPCWV EKN AKSNGSSRCSSS VSDY+ S
Sbjct: 113 ATVQYLPLNNGFPLPCWVGGEKNVGGVDGVDGINGGGDRKAKSNGSSRCSSSVVSDYQSS 172
Query: 171 SREDGGSTDSHSHSANSLAEPTQLNSSKEANI-RNQPEESDS--SPPVKSQQYGNNVQEE 227
SRE+GGSTDSHSHS +SLAEP QLN+SKE +I +QPEES S S P++ +Q +QE
Sbjct: 173 SREEGGSTDSHSHSVHSLAEPAQLNTSKEISIGTSQPEESASASSHPIRPKQGNTTIQEI 232
Query: 228 KQSVRQTQSNVVTRPEPVKLREENAENRKTLSMPNSKPLSNENSSNGTLKESKDEILGKP 287
K+ + + TRP+P E EN KPLSNEN + K EI+GKP
Sbjct: 233 KKHIAKE-----TRPKPNPNSPEPIEN---------KPLSNENLT-------KVEIMGKP 271
Query: 288 PLPKPLSQAS-SLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFV 346
P KPLS S SLP MPYVSTKG+ NGRTVNGFLYRYT SEVSI+CVCHGSTFSPAEFV
Sbjct: 272 P--KPLSHTSYSLPPMPYVSTKGD--NGRTVNGFLYRYTKSEVSIICVCHGSTFSPAEFV 327
Query: 347 QHAGGTDITHPLKHITVIPS 366
QHAGGTD THPL+ ITVIPS
Sbjct: 328 QHAGGTDTTHPLRQITVIPS 347
>Glyma06g22210.2
Length = 244
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPL 358
L QMP V+T G+GPNG+ + GFLY+Y + +V IVCVCHG+ +PAEFV HAGG ++ +P+
Sbjct: 175 LRQMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMHAGGKEVANPM 234
Query: 359 KHITVIPSAF 368
KHITV+ ++F
Sbjct: 235 KHITVLSNSF 244
>Glyma06g22210.3
Length = 249
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPL 358
L QMP V+T G+GPNG+ + GFLY+Y + +V IVCVCHG+ +PAEFV HAGG ++ +P+
Sbjct: 180 LRQMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMHAGGKEVANPM 239
Query: 359 KHITVIPSAF 368
KHITV+ ++F
Sbjct: 240 KHITVLSNSF 249
>Glyma06g22210.1
Length = 249
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPL 358
L QMP V+T G+GPNG+ + GFLY+Y + +V IVCVCHG+ +PAEFV HAGG ++ +P+
Sbjct: 180 LRQMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMHAGGKEVANPM 239
Query: 359 KHITVIPSAF 368
KHITV+ ++F
Sbjct: 240 KHITVLSNSF 249
>Glyma02g13120.1
Length = 381
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 298 SLPQMPYVSTKGNGPNGRTVNGFLYRY-TNSEVSIVCVCHGSTFSPAEFVQHAGGTDITH 356
S+ MP V TKG+GPNGR + G LY+Y EV I+CVCHG+ SPAEFV+HAGG D+ H
Sbjct: 308 SMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAH 367
Query: 357 PLKHITVIPSA 367
PL+HI V PSA
Sbjct: 368 PLRHIVVNPSA 378
>Glyma18g50240.1
Length = 377
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRY-TNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHP 357
L MP VSTKG+GPNG+ + GFLYRY EV IVCVCHGS +P+EFV+HAGG D+ +P
Sbjct: 307 LEDMPCVSTKGDGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANP 366
Query: 358 LKHITVIPSAF 368
LKHI V PS
Sbjct: 367 LKHIVVSPSFL 377
>Glyma08g27010.1
Length = 383
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRY-TNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHP 357
L MP VSTKG GPNG+ + GFLYRY EV IVCVCHGS +P+EFV+HAGG D+ +P
Sbjct: 313 LEDMPCVSTKGEGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANP 372
Query: 358 LKHITVIPSAF 368
LKHI V PS
Sbjct: 373 LKHIVVSPSLL 383
>Glyma04g32390.1
Length = 247
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPL 358
L +MP V+T G+GPNG+ + GFLY+Y + +V IVCVCHG+ +PAEFV HAGG ++ +P+
Sbjct: 178 LRRMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMHAGGKEVANPM 237
Query: 359 KHITVIPSAF 368
KHITV+ ++F
Sbjct: 238 KHITVLSNSF 247
>Glyma01g07390.1
Length = 407
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 298 SLPQMPYVSTKGNGPNGRTVNGFLYRYTNSE-VSIVCVCHGSTFSPAEFVQHAGGTDITH 356
S+ MP V TKG+GPNGR + G LY+Y E V I+CVCHG+ SPAEFV+HAGG D+ +
Sbjct: 334 SMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAY 393
Query: 357 PLKHITVIPSA 367
PL+HI V PSA
Sbjct: 394 PLRHIVVNPSA 404
>Glyma01g34820.1
Length = 495
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 16/124 (12%)
Query: 228 KQSVRQTQSNVVTRPEPVKLREENAENRKTLSMPNSKPLSNENSSNGTLKESKDEILGKP 287
KQ V + S+ ++PE VK R N +K +S +++ G + + + KP
Sbjct: 359 KQRVNEEGSS--SQPEDVKARSTNLR---------AKDVSGQSTGEGAIIDFSNI---KP 404
Query: 288 PLPK--PLSQASSLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEF 345
L S P +P+VST G+GPNGRT++G Y+Y+ ++V IVC CHGS +P EF
Sbjct: 405 GLAADVKFGGCGSYPNLPWVSTSGSGPNGRTISGVTYKYSTNQVRIVCACHGSHMTPEEF 464
Query: 346 VQHA 349
V+HA
Sbjct: 465 VRHA 468
>Glyma09g32660.3
Length = 479
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 298 SLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
S P +P+VST G+GPNGRT++G Y+Y ++V IVC CHGS +P EFV+H+
Sbjct: 401 SYPNLPWVSTSGSGPNGRTISGVTYKYGTNQVRIVCACHGSHMTPEEFVRHS 452
>Glyma09g32660.1
Length = 479
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 298 SLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
S P +P+VST G+GPNGRT++G Y+Y ++V IVC CHGS +P EFV+H+
Sbjct: 401 SYPNLPWVSTSGSGPNGRTISGVTYKYGTNQVRIVCACHGSHMTPEEFVRHS 452
>Glyma05g00350.1
Length = 95
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 301 QMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLKH 360
QMP V T G G G+ G LY+Y +V IVCVCHGS SP EFV HAGG ++ P+KH
Sbjct: 34 QMPCVITTGGGTTGKRTEGLLYKYKRGQVCIVCVCHGSFLSPTEFVMHAGGKEVADPMKH 93
Query: 361 IT 362
IT
Sbjct: 94 IT 95
>Glyma08g03960.1
Length = 52
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 300 PQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
P +P+VST G+GP GRT++G YR+ +++ IVC CHGS +P EFV+ A
Sbjct: 1 PNLPWVSTTGSGPTGRTISGVTYRFNTNQIRIVCACHGSHMTPKEFVRLA 50
>Glyma17g08690.1
Length = 71
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 302 MPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLKHI 361
MP V T G+G T+ G V IVCVCHGS SP EFV HAGG ++ P+KHI
Sbjct: 1 MPSVITTGDG----TITG------KRTVCIVCVCHGSFPSPTEFVMHAGGKEVADPMKHI 50
Query: 362 TVIPSAFG 369
TV +FG
Sbjct: 51 TVCSDSFG 58
>Glyma09g32660.2
Length = 445
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 308 KGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
+G+GPNGRT++G Y+Y ++V IVC CHGS +P EFV+H+
Sbjct: 377 EGSGPNGRTISGVTYKYGTNQVRIVCACHGSHMTPEEFVRHS 418