Miyakogusa Predicted Gene

Lj3g3v0718720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718720.1 Non Chatacterized Hit- tr|I1MMA1|I1MMA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5479
PE=,50,0.0003,seg,NULL,CUFF.41312.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g11160.1                                                        55   1e-08

>Glyma16g11160.1 
          Length = 144

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 62  KQPIASDAQISQXXXXXXXXXXXXXXXPVFVLTDEWREFFAKSEAKRKIE 111
           +QP +SDA+IS                PVFVLTDEWREFFA+SEA+RK+E
Sbjct: 86  EQPFSSDARISLELEHIVLDGEEEEDEPVFVLTDEWREFFAQSEARRKLE 135