Miyakogusa Predicted Gene

Lj3g3v0718360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718360.1 Non Chatacterized Hit- tr|C0PJM2|C0PJM2_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,42.42,9e-19,seg,NULL,CUFF.41164.1
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24450.1                                                       236   2e-62
Glyma07g32080.1                                                       228   6e-60

>Glyma13g24450.1 
          Length = 216

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/227 (57%), Positives = 160/227 (70%), Gaps = 13/227 (5%)

Query: 1   MADSETAEGYQPPAEFEEDSNGALIDLPMTGSTELWLLRLPYSKDFLSDIHGKELPVNLQ 60
           M D E  EGY+P  E+ EDSN  LI+L  T STEL  L+LP S DFLSDIHG++L + L 
Sbjct: 3   MVDLEGKEGYRPSTEYVEDSNETLINL--TDSTELLFLKLPSSNDFLSDIHGQKLFLTLH 60

Query: 61  NDGKLAWFESSSGKRYDFVSYACQEPAETVFIPSATDPIIGKVSRRVSTVHYSDPKELEK 120
           NDGKLA F+ SSGK YDFVSY+ QEP ETVF+ S+T+P IGK+SRRVSTVHYSDPKELE 
Sbjct: 61  NDGKLASFKDSSGKVYDFVSYSAQEPDETVFV-SSTEPKIGKISRRVSTVHYSDPKELEN 119

Query: 121 LSATSAGKVHRNSAGATGTTSSRYFPMXXXXXXXXXXXXXXXXXXXKSTVSEVTDPSSKR 180
           L++T+A   H NS+G TGTTSSRYFPM                   +S+++E ++PSS  
Sbjct: 120 LNSTNAKHAHGNSSGVTGTTSSRYFPM------QSSGAASSKGSRQRSSLTEASEPSS-- 171

Query: 181 VSKSTASEDISSGSHVPESSHGHSTGISSMSSDQSHGAKSKRRKHKE 227
           +SK   +    S S++ E+SHGHSTGISSMS D SH  K+KRRKHKE
Sbjct: 172 ISKRRHAS--KSKSNLSEASHGHSTGISSMSPDHSHEGKAKRRKHKE 216


>Glyma07g32080.1 
          Length = 216

 Score =  228 bits (580), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 129/229 (56%), Positives = 155/229 (67%), Gaps = 17/229 (7%)

Query: 1   MADSETAEGYQPPAEFEEDSNGALIDLPMTGSTELWLLRLPYSKDFLSDIHGKELPVNLQ 60
           M D E  EGY P  E+ EDSN  LI+L  T STEL  L+LP S DFLSDIHG++L + L 
Sbjct: 3   MVDLEGTEGYIPSTEYVEDSNETLINL--TDSTELLFLKLPSSNDFLSDIHGQKLFLTLH 60

Query: 61  NDGKLAWFESSSGKRYDFVSYACQEPAETVFIPSATDPIIGKVSRRVSTVHYSDPKELEK 120
           NDGKLA FE SSGK YDFVSY+ QEP ETVF+PS T+P IGK+S RVSTVHY  PKELEK
Sbjct: 61  NDGKLASFEDSSGKVYDFVSYSAQEPDETVFVPS-TEPKIGKISMRVSTVHYPGPKELEK 119

Query: 121 LSATSAGKVHRNSAGATGTTSSRYFPMXXXXXXXXXXXXXXXXXXXKSTVSEVTDPS--S 178
           L++T+A   H NS+G TGTTSSRYFPM                   +S+++E ++PS  S
Sbjct: 120 LNSTNAKHAHGNSSGVTGTTSSRYFPM------QSGGAASSKGSRQRSSLTEASEPSSIS 173

Query: 179 KRVSKSTASEDISSGSHVPESSHGHSTGISSMSSDQSHGAKSKRRKHKE 227
           KR   S +  ++S      E+SH HSTGISSMS + SH  K+KRRKHKE
Sbjct: 174 KRRHASKSKSNLS------ETSHEHSTGISSMSPNHSHEGKAKRRKHKE 216