Miyakogusa Predicted Gene

Lj3g3v0697060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0697060.1 Non Chatacterized Hit- tr|I1I1W4|I1I1W4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,68.42,0.000000000000004,Histone-fold,Histone-fold; no
description,Histone-fold; seg,NULL; CBFD_NFYB_HMF,Transcription
factor,CUFF.41141.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g35980.1                                                       197   2e-51
Glyma12g34510.1                                                       193   3e-50
Glyma06g17780.1                                                       111   1e-25
Glyma08g17630.1                                                       111   2e-25
Glyma04g37290.2                                                       111   2e-25
Glyma04g37290.1                                                       111   2e-25
Glyma19g42460.1                                                       110   4e-25
Glyma20g37620.1                                                       110   4e-25
Glyma10g29690.1                                                       109   5e-25
Glyma03g39910.1                                                       109   8e-25
Glyma13g27780.1                                                       100   3e-22
Glyma08g15700.1                                                        99   1e-21
Glyma13g27770.1                                                        88   3e-18
Glyma13g27790.1                                                        85   2e-17
Glyma02g09860.1                                                        75   1e-14
Glyma13g25860.3                                                        54   4e-08
Glyma13g25860.2                                                        54   4e-08
Glyma13g25860.1                                                        54   4e-08
Glyma15g36170.1                                                        54   5e-08
Glyma06g46850.1                                                        53   9e-08

>Glyma13g35980.1 
          Length = 123

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 99/100 (99%)

Query: 1   MRQAGAYSGLLCGGISGRTGPHSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIE 60
           MRQAGAYSGLLCGG+SGRTGPHSLPLARIKKIMK SGEDVKMISGE+PIIFSKACE+FIE
Sbjct: 1   MRQAGAYSGLLCGGVSGRTGPHSLPLARIKKIMKNSGEDVKMISGEAPIIFSKACELFIE 60

Query: 61  ELTRRSWIMAMQGKRRTLHKDDVASAVIATDVFDFLITLV 100
           ELTRRSWIMA+QGKRRTLHK+D+ASAVIATD+FDFLITLV
Sbjct: 61  ELTRRSWIMAIQGKRRTLHKEDLASAVIATDIFDFLITLV 100


>Glyma12g34510.1 
          Length = 123

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 90/100 (90%), Positives = 98/100 (98%)

Query: 1   MRQAGAYSGLLCGGISGRTGPHSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIE 60
           MRQAGAYSGLLCGG+SGRTGPHSLPLARIKKIMK SGE VKMISGE+PIIFSKAC++FIE
Sbjct: 1   MRQAGAYSGLLCGGVSGRTGPHSLPLARIKKIMKNSGEGVKMISGEAPIIFSKACDLFIE 60

Query: 61  ELTRRSWIMAMQGKRRTLHKDDVASAVIATDVFDFLITLV 100
           ELTRRSWIMA+QGKRRTLHK+D+ASAVIATD+FDFLITLV
Sbjct: 61  ELTRRSWIMAIQGKRRTLHKEDLASAVIATDIFDFLITLV 100


>Glyma06g17780.1 
          Length = 229

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 66/79 (83%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           H LPLARIKKIMK + EDV+MIS E+PI+F+KACE+FI ELT RSW+ A + KRRTL K+
Sbjct: 70  HQLPLARIKKIMK-ADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 128

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 129 DIAAAITRTDIFDFLVDIV 147


>Glyma08g17630.1 
          Length = 271

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK + EDV+MIS E+P+IF+KACE+FI ELT RSWI   + KRRTL K+
Sbjct: 105 HSLPLARIKKIMK-ADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKN 163

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+   DVFDFL+ ++
Sbjct: 164 DIAAAISRNDVFDFLVDII 182


>Glyma04g37290.2 
          Length = 222

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 66/79 (83%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           H LPLARIKKIMK + EDV+MIS E+PI+F+KACE+FI ELT RSW+ A + KRRTL K+
Sbjct: 66  HQLPLARIKKIMK-ADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRTLQKN 124

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 125 DIAAAITRTDIFDFLVDIV 143


>Glyma04g37290.1 
          Length = 225

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 66/79 (83%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           H LPLARIKKIMK + EDV+MIS E+PI+F+KACE+FI ELT RSW+ A + KRRTL K+
Sbjct: 66  HQLPLARIKKIMK-ADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRTLQKN 124

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 125 DIAAAITRTDIFDFLVDIV 143


>Glyma19g42460.1 
          Length = 294

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK + EDV+MIS E+P+IF++ACE+FI ELT RSW    + KRRTL K+
Sbjct: 134 HSLPLARIKKIMK-ADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 192

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 193 DIAAAITRTDIFDFLVDIV 211


>Glyma20g37620.1 
          Length = 263

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK + EDV+MIS E+P+IF++ACE+FI ELT RSW    + KRRTL K+
Sbjct: 98  HSLPLARIKKIMK-ADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 156

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 157 DIAAAITRTDIFDFLVDIV 175


>Glyma10g29690.1 
          Length = 237

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK + EDV+MIS E+P+IF++ACE+FI ELT RSW    + KRRTL K+
Sbjct: 77  HSLPLARIKKIMK-ADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 135

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 136 DIAAAITRTDIFDFLVDIV 154


>Glyma03g39910.1 
          Length = 303

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK + EDV+MIS E+P+IF++ACE+FI ELT RSW    + KRRTL K+
Sbjct: 166 HSLPLARIKKIMK-ADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 224

Query: 82  DVASAVIATDVFDFLITLV 100
           D+A+A+  TD+FDFL+ +V
Sbjct: 225 DIAAAITRTDIFDFLVDIV 243


>Glyma13g27780.1 
          Length = 210

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 3/101 (2%)

Query: 2   RQAGAYSGLLCGGISGRTG--PHSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFI 59
           +Q   +    C  I   T    HSLPLARIKKIMK S EDVK++S E+P++F+KACE+FI
Sbjct: 66  QQLNNFWAKQCQEIQEATDLRTHSLPLARIKKIMK-SDEDVKLVSAEAPVVFAKACEMFI 124

Query: 60  EELTRRSWIMAMQGKRRTLHKDDVASAVIATDVFDFLITLV 100
            ELT R+W    + +R+ + K D+AS++   DVFDFLI  V
Sbjct: 125 MELTLRAWANVEEDQRKIIKKHDIASSISRADVFDFLIDTV 165


>Glyma08g15700.1 
          Length = 205

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLP ARIKKIMK +  DV+M+S E+P++F+KACE+FI ELT ++W  A   +RR L K 
Sbjct: 79  HSLPYARIKKIMK-ADRDVRMVSAEAPVLFAKACEMFIMELTMKAWANAEDHRRRILQKS 137

Query: 82  DVASAVIATDVFDFLITLV 100
           D+ASA+  TDVFDFL  +V
Sbjct: 138 DIASAISKTDVFDFLEDIV 156


>Glyma13g27770.1 
          Length = 243

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPLARIKKIMK   E V+M+S E+ ++F+KACE+F+ ELT R+   A + +R+ + K 
Sbjct: 82  HSLPLARIKKIMKGE-EGVRMVSAEASVVFAKACEMFMMELTIRASGSAEENQRKIIKKC 140

Query: 82  DVASAVIATDVFDFLITLV 100
           DVASA+  TDVFDFL+ +V
Sbjct: 141 DVASAISRTDVFDFLVDIV 159


>Glyma13g27790.1 
          Length = 192

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
           HSLPL+RIKKI+K + +DVKMIS E+P++F+KACE+FI+ELT R+W      K + L + 
Sbjct: 67  HSLPLSRIKKIIK-TDKDVKMISAETPVVFAKACEMFIKELTIRAWANTEARKGKILSQR 125

Query: 82  DVASAVIATDVFDFL 96
           D+ SA+  T  FDFL
Sbjct: 126 DLVSAISQTASFDFL 140


>Glyma02g09860.1 
          Length = 201

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 22  HSLPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKD 81
             LPLARI+++MK S   V+MIS E P++ SKACEIFI+ELT R+W+ A +  +  +   
Sbjct: 5   QKLPLARIRRMMK-SEPGVQMISSEIPMLMSKACEIFIQELTFRAWMHAEKNNKSIVQPC 63

Query: 82  DVASAVIATDVFDFLITLV 100
           DVA  ++ TD  +FL  ++
Sbjct: 64  DVAKVIMQTDTMNFLTEII 82


>Glyma13g25860.3 
          Length = 141

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 24  LPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKDDV 83
            P ARIKKIM+ + EDV  I+   P++ SKA E+F+++L  R++ + +Q   +T++   +
Sbjct: 9   FPAARIKKIMQ-ADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHL 67

Query: 84  ASAVIATDVFDFLITLV 100
              V + +VFDFL  +V
Sbjct: 68  KHCVQSYNVFDFLRDVV 84


>Glyma13g25860.2 
          Length = 141

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 24  LPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKDDV 83
            P ARIKKIM+ + EDV  I+   P++ SKA E+F+++L  R++ + +Q   +T++   +
Sbjct: 9   FPAARIKKIMQ-ADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHL 67

Query: 84  ASAVIATDVFDFLITLV 100
              V + +VFDFL  +V
Sbjct: 68  KHCVQSYNVFDFLRDVV 84


>Glyma13g25860.1 
          Length = 287

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 24  LPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKDDV 83
            P ARIKKIM+ + EDV  I+   P++ SKA E+F+++L  R++ + +Q   +T++   +
Sbjct: 9   FPAARIKKIMQ-ADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHL 67

Query: 84  ASAVIATDVFDFLITLV 100
              V + +VFDFL  +V
Sbjct: 68  KHCVQSYNVFDFLRDVV 84


>Glyma15g36170.1 
          Length = 299

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 24  LPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKDDV 83
            P ARIKKIM+ + EDV  I+   P++ SKA E+F+++L  R++ + +Q   +T++   +
Sbjct: 9   FPAARIKKIMQ-ADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHL 67

Query: 84  ASAVIATDVFDFLITLV 100
              V + +VFDFL  +V
Sbjct: 68  KHCVQSYNVFDFLRDVV 84


>Glyma06g46850.1 
          Length = 292

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 24  LPLARIKKIMKKSGEDVKMISGESPIIFSKACEIFIEELTRRSWIMAMQGKRRTLHKDDV 83
            P ARIKKIM+ + EDV  I+   P++ SKA E+F+++L  R++ + +Q   +T++   +
Sbjct: 9   FPAARIKKIMQ-ADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAKTMNSLHL 67

Query: 84  ASAVIATDVFDFLITLV 100
              V +  VFDFL  +V
Sbjct: 68  KHCVQSYSVFDFLRDIV 84