Miyakogusa Predicted Gene
- Lj3g3v0682870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0682870.1 tr|A2Q1F1|A2Q1F1_MEDTR SAM (And some other
nucleotide) binding motif OS=Medicago truncatula
GN=MtrDR,86.93,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; no description,NULL; Met_10,tRNA
transfer,CUFF.41130.1
(199 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g35870.1 365 e-101
Glyma12g34620.1 364 e-101
Glyma03g05860.1 174 6e-44
Glyma17g12990.2 96 2e-20
Glyma17g12990.1 96 3e-20
Glyma05g08000.1 94 6e-20
>Glyma13g35870.1
Length = 601
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/199 (86%), Positives = 190/199 (95%)
Query: 1 MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
++ A YW+SRL TERQRLLSGFTRNDV+CDVFSGVGPLAISAARIVKRV+ANDLNPYA+
Sbjct: 403 VDLATVYWSSRLGTERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAV 462
Query: 61 EYLERNSVLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGI 120
EYLERN VLNKL+RKIKVFNMDGRRFIK++Y SD +QSITQVVMNLP++AAEFLDAFRGI
Sbjct: 463 EYLERNCVLNKLDRKIKVFNMDGRRFIKSMYDSDISQSITQVVMNLPSEAAEFLDAFRGI 522
Query: 121 YKDRPTDGDFTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWML 180
YK+RP DG++TLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNV+MRRVRLVAPGKWML
Sbjct: 523 YKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWML 582
Query: 181 CASFILPKSVAFAKTAVDT 199
CASF+LPKSVAFA TAVDT
Sbjct: 583 CASFLLPKSVAFADTAVDT 601
>Glyma12g34620.1
Length = 533
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/200 (88%), Positives = 190/200 (95%), Gaps = 1/200 (0%)
Query: 1 MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
++ A YW+SRL TERQRLLSGFTRNDV+CDVFSGVGPLAISAARIVKRV+ANDLNPYA+
Sbjct: 334 VDLATVYWSSRLGTERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAV 393
Query: 61 EYLERNSVLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGI 120
EYLERN VLNKLERKIKVFNMDGRRFIKA+Y SD +QSITQVVMNLP++AAEFLDAFRGI
Sbjct: 394 EYLERNCVLNKLERKIKVFNMDGRRFIKAMYDSDISQSITQVVMNLPSEAAEFLDAFRGI 453
Query: 121 YKDRPTDGDFTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWML 180
YK+RP DG++TLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNV+MRRVRLVAPGKWML
Sbjct: 454 YKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWML 513
Query: 181 CASFILPKSVAFAKT-AVDT 199
CASFILPKSVAFA T AVDT
Sbjct: 514 CASFILPKSVAFADTAAVDT 533
>Glyma03g05860.1
Length = 117
Score = 174 bits (440), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 96/117 (82%), Gaps = 12/117 (10%)
Query: 32 VFSGVGPLAISAARIVKRVYANDLNPYAIEYLERNSVLNKLERKIKVFNMDGRRFIKAIY 91
VFSGVGPLAIS RIVKRV+ANDLNPYA+EYLERN VLNKLERKIKVFNMDGRRFIKA+Y
Sbjct: 1 VFSGVGPLAISVVRIVKRVFANDLNPYAVEYLERNCVLNKLERKIKVFNMDGRRFIKAMY 60
Query: 92 ASDKAQSITQVVMNLPNDAAEFLD------------AFRGIYKDRPTDGDFTLPLIH 136
SD +QSITQVVMN P++AAEFL AF GIYK+RP DG++TLPLIH
Sbjct: 61 DSDISQSITQVVMNFPSEAAEFLGVNNYNILASSAYAFWGIYKNRPKDGEYTLPLIH 117
>Glyma17g12990.2
Length = 404
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 1 MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
+++ YWNSRL E +RL+S F ICD+F+G+GP AI AA+ VYANDLNP +I
Sbjct: 219 LDYRLVYWNSRLEHEHKRLVSMFQAGQTICDMFTGIGPFAIPAAQKGCIVYANDLNPDSI 278
Query: 61 EYLERNSVLNKLERKIKVFNMDGRRFIKAI 90
YL N+ +NK++ +I +NMD R+FI +
Sbjct: 279 HYLRINAKINKVDDRIYAYNMDARKFISQM 308
>Glyma17g12990.1
Length = 516
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 1 MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
+++ YWNSRL E +RL+S F ICD+F+G+GP AI AA+ VYANDLNP +I
Sbjct: 219 LDYRLVYWNSRLEHEHKRLVSMFQAGQTICDMFTGIGPFAIPAAQKGCIVYANDLNPDSI 278
Query: 61 EYLERNSVLNKLERKIKVFNMDGRRFIKAI 90
YL N+ +NK++ +I +NMD R+FI +
Sbjct: 279 HYLRINAKINKVDDRIYAYNMDARKFISQM 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 90 IYASDKAQSITQVVMNLPNDAAEFLDAFRGIYKDRPTDGDFTLPLIHVYGFSKARD-PEF 148
I + + + V+MNLP A +FLDAFRG+ + + G LP IH Y F +A + PE
Sbjct: 412 ICVTKTWEHVDHVIMNLPASAVQFLDAFRGLIQKKYWKG--CLPWIHCYCFIRATETPE- 468
Query: 149 DFHERIRIALLEVAVNVEMR-----RVRLVAPGKWMLCASFILPKSV 190
IA+ E A+N ++ RVR VAP K M C SF LP++
Sbjct: 469 -----TIIAVAESALNTRIQDSTFHRVRDVAPNKAMYCLSFRLPEAC 510
>Glyma05g08000.1
Length = 464
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 1 MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
++++ YWNSRL E +RL+S F + ICD+F+G+GP AI AA+ VYANDLNP +I
Sbjct: 207 LDYSLVYWNSRLEHEHKRLVSMFQAGETICDMFAGIGPFAIPAAQKGCIVYANDLNPDSI 266
Query: 61 EYLERNSVLNKLERKIKVFNMDGRRFIKAI 90
YL N+ +NK+ I +NMD R+FI +
Sbjct: 267 HYLRINAKINKVGDCIYAYNMDARKFISQM 296