Miyakogusa Predicted Gene

Lj3g3v0679240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0679240.2 Non Chatacterized Hit- tr|D7MEG1|D7MEG1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,52.27,3e-17,
,CUFF.41096.2
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g34860.1                                                       165   1e-41
Glyma13g35730.1                                                       162   1e-40

>Glyma12g34860.1 
          Length = 240

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 81/84 (96%)

Query: 1   MQGTCPNCGNDFQVFKSTLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 60
           MQGTCPNCGNDFQVFKS+LNDDLQLCP+CGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN
Sbjct: 157 MQGTCPNCGNDFQVFKSSLNDDLQLCPFCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 216

Query: 61  FSRSSNEKDSGRAIDVEAEIMDAD 84
           F+RS NEKDSG+AIDVEAEI D D
Sbjct: 217 FTRSRNEKDSGKAIDVEAEIKDVD 240


>Glyma13g35730.1 
          Length = 244

 Score =  162 bits (409), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 75/84 (89%), Positives = 80/84 (95%)

Query: 1   MQGTCPNCGNDFQVFKSTLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 60
           MQGTCPNCGNDFQVFKS+LNDDLQLCP+CGQPFSVVGNEFVKDSVKFSNQ+TTFGQAFNN
Sbjct: 161 MQGTCPNCGNDFQVFKSSLNDDLQLCPFCGQPFSVVGNEFVKDSVKFSNQTTTFGQAFNN 220

Query: 61  FSRSSNEKDSGRAIDVEAEIMDAD 84
           F+RS  EKDSG+AIDVEAEI D D
Sbjct: 221 FTRSRKEKDSGKAIDVEAEINDVD 244