Miyakogusa Predicted Gene

Lj3g3v0642560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642560.1 Non Chatacterized Hit- tr|I1JME7|I1JME7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52853
PE,85.51,0,AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I,
conserved site; seg,NULL; tRNA-synt_1c,Glutamyl,CUFF.41068.1
         (561 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g23910.1                                                       966   0.0  
Glyma07g12340.1                                                       805   0.0  
Glyma03g23910.2                                                       681   0.0  
Glyma07g12310.1                                                       174   2e-43
Glyma20g22170.1                                                        77   6e-14
Glyma10g28180.1                                                        76   8e-14

>Glyma03g23910.1 
          Length = 559

 Score =  966 bits (2496), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/559 (84%), Positives = 508/559 (90%), Gaps = 1/559 (0%)

Query: 3   AMLGGATPWSKVVSAPIFHQTHXXXXXXXXXXXXXSVTAHSSPQQPVRVRFAPSPTGNLH 62
           A+L G  PWSKV+  PIFH +H             SV+A S    PVRVRFAPSPTGNLH
Sbjct: 2   ALLCGGMPWSKVIVPPIFHHSHTPRTFFFQRRRF-SVSALSEQPPPVRVRFAPSPTGNLH 60

Query: 63  VGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEALLRDLSWLGLDWDEGPGVGG 122
           VGGARTALFNYLFARSKGGKFVLRIEDTDLERS+RESEEA+L+DLSWLGLDWDEGPGVGG
Sbjct: 61  VGGARTALFNYLFARSKGGKFVLRIEDTDLERSSRESEEAMLKDLSWLGLDWDEGPGVGG 120

Query: 123 DYGPYRQSERNSLYKQHAEKLLQSGQVYRCFCSNEELEKMKEVAKLKQLPPVYTGKWASA 182
           DYGPYRQSERNSLYKQ+AE L QSG VYRCFCSNEELEKMKEVAKLKQLPPVYTGKWASA
Sbjct: 121 DYGPYRQSERNSLYKQYAENLHQSGHVYRCFCSNEELEKMKEVAKLKQLPPVYTGKWASA 180

Query: 183 TNGEVEEELKKGTPYTYRFRVPKGSLKINDIIRGEVVWNLDTLGDFVIMRSNGQPVYNFC 242
           TN EVEEEL+KGTPYTYRFRVPKGSLKIND IRGEV WNLDTLGDFVIMRSNGQPVYNFC
Sbjct: 181 TNEEVEEELEKGTPYTYRFRVPKGSLKINDQIRGEVSWNLDTLGDFVIMRSNGQPVYNFC 240

Query: 243 VTVDDATMAISHVIRAEEHLPNTLRQALIYKALEFPMPHFAHVSLILAPDRSKLSKRHGA 302
           VTVDDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP+FAHVSLILAPDRSKLSKRHGA
Sbjct: 241 VTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGA 300

Query: 303 TSVGQFKEMGYLPQAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAVFDSTKL 362
           TSVGQF+EMGYLP+AMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGA+FDSTKL
Sbjct: 301 TSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKL 360

Query: 363 RWMNGQHLKAQPSEELKSLIGERWKTCGLLNESTGPFIDEAVQLLKDEVYLITEADKSLA 422
           RWMNGQHL+A+PSEEL  LI E WKT GLL  S GPFIDEAV LLKD + LI +ADK+LA
Sbjct: 361 RWMNGQHLRARPSEELTKLIAEYWKTSGLLTVSDGPFIDEAVHLLKDGIDLINDADKALA 420

Query: 423 NLLSYPLHSTLQSNEAESVIQDNLSDFCASLLAAYDSGDLVAALEEGPAGWQKWVKGFGK 482
           NLLSYP+HSTLQS+EAESV+ DNLS+F ASLLAAYDSGDLVAALEEG  GWQKWVKGFGK
Sbjct: 421 NLLSYPVHSTLQSDEAESVLLDNLSEFAASLLAAYDSGDLVAALEEGHTGWQKWVKGFGK 480

Query: 483 SLKRKGKSLFMPLRILLTGKLHGPDMGASVVLLHKAGTTDIIAPEAGFVTVDERFKILRE 542
           SLKRKGKSLFMPLR+LLTGKLHGPDMGASV LL++AGT++++APE+GFVT+DERFK+LR+
Sbjct: 481 SLKRKGKSLFMPLRLLLTGKLHGPDMGASVALLYRAGTSNVVAPESGFVTLDERFKMLRQ 540

Query: 543 INWETLSKDIPVKETAASV 561
           I+WE LSKD PVKETAA V
Sbjct: 541 IDWEALSKDQPVKETAAPV 559


>Glyma07g12340.1 
          Length = 499

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/445 (87%), Positives = 415/445 (93%)

Query: 117 GPGVGGDYGPYRQSERNSLYKQHAEKLLQSGQVYRCFCSNEELEKMKEVAKLKQLPPVYT 176
           GPGVGGDYGPYRQS+RNSLYKQ A+ L QSG VYRCFCSNEELEKMKE AKLKQLPPVYT
Sbjct: 55  GPGVGGDYGPYRQSDRNSLYKQFADNLHQSGHVYRCFCSNEELEKMKEDAKLKQLPPVYT 114

Query: 177 GKWASATNGEVEEELKKGTPYTYRFRVPKGSLKINDIIRGEVVWNLDTLGDFVIMRSNGQ 236
           GKWASATN EVEEEL KGTPYTYRFRVPKGSLKIND IRGEV WNLDTLGDFVIMRSNGQ
Sbjct: 115 GKWASATNEEVEEELAKGTPYTYRFRVPKGSLKINDQIRGEVSWNLDTLGDFVIMRSNGQ 174

Query: 237 PVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALEFPMPHFAHVSLILAPDRSKL 296
           PVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP+FAHVSLILAPDRSKL
Sbjct: 175 PVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKL 234

Query: 297 SKRHGATSVGQFKEMGYLPQAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAV 356
           SKRHGATSVGQF+EMGYLP+AMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGA+
Sbjct: 235 SKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAI 294

Query: 357 FDSTKLRWMNGQHLKAQPSEELKSLIGERWKTCGLLNESTGPFIDEAVQLLKDEVYLITE 416
           FDSTKLRWMNGQHL+A+PSEEL  LIGE WKT GLL  S G FIDEAVQLLKD + LI +
Sbjct: 295 FDSTKLRWMNGQHLRARPSEELTKLIGEYWKTSGLLTVSDGSFIDEAVQLLKDGIDLIND 354

Query: 417 ADKSLANLLSYPLHSTLQSNEAESVIQDNLSDFCASLLAAYDSGDLVAALEEGPAGWQKW 476
           ADK+LANLLSYP++STLQS+EAESV+QDNLS+F ASLLAAYDSGDLVAALEEG AGWQKW
Sbjct: 355 ADKALANLLSYPVYSTLQSDEAESVLQDNLSEFAASLLAAYDSGDLVAALEEGHAGWQKW 414

Query: 477 VKGFGKSLKRKGKSLFMPLRILLTGKLHGPDMGASVVLLHKAGTTDIIAPEAGFVTVDER 536
           VKGFGK LKRKGKSLFMPLR+LLTGK+HGPDMGASVVLL+KAGT++ +AP+AGFVT+DER
Sbjct: 415 VKGFGKLLKRKGKSLFMPLRLLLTGKIHGPDMGASVVLLYKAGTSNAVAPDAGFVTLDER 474

Query: 537 FKILREINWETLSKDIPVKETAASV 561
           FKIL +INWETLSKD  VKETA  V
Sbjct: 475 FKILGQINWETLSKDQTVKETADPV 499


>Glyma03g23910.2 
          Length = 376

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/367 (90%), Positives = 345/367 (94%)

Query: 38  SVTAHSSPQQPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTR 97
           S++A S    PVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERS+R
Sbjct: 7   SISALSEQPPPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSSR 66

Query: 98  ESEEALLRDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQHAEKLLQSGQVYRCFCSNE 157
           ESEEA+L+DLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQ+AE L QSG VYRCFCSNE
Sbjct: 67  ESEEAMLKDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYAENLHQSGHVYRCFCSNE 126

Query: 158 ELEKMKEVAKLKQLPPVYTGKWASATNGEVEEELKKGTPYTYRFRVPKGSLKINDIIRGE 217
           ELEKMKEVAKLKQLPPVYTGKWASATN EVEEEL+KGTPYTYRFRVPKGSLKIND IRGE
Sbjct: 127 ELEKMKEVAKLKQLPPVYTGKWASATNEEVEEELEKGTPYTYRFRVPKGSLKINDQIRGE 186

Query: 218 VVWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALEF 277
           V WNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL F
Sbjct: 187 VSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGF 246

Query: 278 PMPHFAHVSLILAPDRSKLSKRHGATSVGQFKEMGYLPQAMVNYLALLGWGDGTENEFFT 337
           PMP+FAHVSLILAPDRSKLSKRHGATSVGQF+EMGYLP+AMVNYLALLGWGDGTENEFFT
Sbjct: 247 PMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFT 306

Query: 338 LDQLVEKFTIERVNKSGAVFDSTKLRWMNGQHLKAQPSEELKSLIGERWKTCGLLNESTG 397
           LDQLVEKFTIERVNKSGA+FDSTKLRWMNGQHL+A+PSEEL  LI E WKT GLL  S G
Sbjct: 307 LDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIAEYWKTSGLLTVSDG 366

Query: 398 PFIDEAV 404
           PFID  +
Sbjct: 367 PFIDRVM 373


>Glyma07g12310.1 
          Length = 142

 Score =  174 bits (442), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 104/142 (73%), Gaps = 7/142 (4%)

Query: 3   AMLGGATPWSKVVSAPIFHQTHXXXXXXXXXXXXXSVTAHSSPQQP---VRVRFAPSPTG 59
           A+L G TPWSKV  +PIFH +H             SV+A  S QQP   VRVRFAPSPTG
Sbjct: 2   ALLCGGTPWSKVTISPIFHHSHTPRTFFFQRRRF-SVSAAFSEQQPPPPVRVRFAPSPTG 60

Query: 60  NLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEALLRDLSWLGLDWDEG-- 117
           NLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEA+L+DLSWLGLDWDEG  
Sbjct: 61  NLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEAMLKDLSWLGLDWDEGVL 120

Query: 118 -PGVGGDYGPYRQSERNSLYKQ 138
              +G     + +  R SLY+Q
Sbjct: 121 EHSIGCPLIFFLRPSRASLYRQ 142


>Glyma20g22170.1 
          Length = 732

 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 42/246 (17%)

Query: 49  VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEALLRDLS 108
           VR+RFAP P+G LH+G ++ AL N  FA    G+ ++R +DT+  + + E  + L++D+ 
Sbjct: 225 VRLRFAPEPSGYLHIGHSKAALLNKYFAERYQGQVIVRFDDTNPAKESNEFVDNLIKDID 284

Query: 109 WLGLDWDEGPGVGGDYGPYRQSERNSLYKQHAEKLLQSGQVYRCFCSNEELEKMKEVAKL 168
            LG+ + E      DY P           + AEKL++ G+ Y      E+++K +     
Sbjct: 285 TLGIKY-EQITYTSDYFPELM--------EMAEKLIREGKTYVDDTPREQMQKER----- 330

Query: 169 KQLPPVYTGKWASATNGEVEEELK------KGTPYTYRFRVPKGSLKIND---IIRGEVV 219
                   G  +   N  VEE LK       GT    +  V +G L + D    +R  V 
Sbjct: 331 ------MDGIESKCRNNIVEENLKLWKEMIAGTERGLQCCV-RGKLDMQDPNKSLRDPVY 383

Query: 220 WNLDTLGDFVI-MRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNT-----------LR 267
           +  + +    I  +    P Y+F     DA   I+H +R+ E+               LR
Sbjct: 384 YRCNPMPHHRIGSKYKVYPTYDFACPYVDAIEGITHALRSSEYHDRNAQYYRIQEDMGLR 443

Query: 268 QALIYK 273
           + LIY+
Sbjct: 444 KVLIYE 449


>Glyma10g28180.1 
          Length = 733

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 42/246 (17%)

Query: 49  VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEALLRDLS 108
           VR+RFAP P+G LH+G ++ AL N  FA    G+ ++R +DT+  + + E  + L++D+ 
Sbjct: 225 VRLRFAPEPSGYLHIGHSKAALLNKYFAERYKGQVIVRFDDTNPAKESNEFVDNLIKDID 284

Query: 109 WLGLDWDEGPGVGGDYGPYRQSERNSLYKQHAEKLLQSGQVYRCFCSNEELEKMKEVAKL 168
            LG+ + E      DY P           + AEKL++ G+ Y      E+++K +     
Sbjct: 285 TLGIKY-EQITYTSDYFPELM--------EMAEKLIRQGKAYVDDTPREQMQKER----- 330

Query: 169 KQLPPVYTGKWASATNGEVEEELK------KGTPYTYRFRVPKGSLKIND---IIRGEVV 219
                   G  +   N  VEE LK       GT    +  V +G L + D    +R  V 
Sbjct: 331 ------MDGIDSKCRNNSVEENLKLWKEMIAGTERGLQCCV-RGKLDMQDPNKSLRDPVY 383

Query: 220 WNLDTLGDFVI-MRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNT-----------LR 267
           +  + +    I  +    P Y+F     D+   I+H +R+ E+               LR
Sbjct: 384 YRCNPMPHHRIGSKYKVYPTYDFACPYVDSIEGITHALRSSEYHDRNAQYYWIQEDMGLR 443

Query: 268 QALIYK 273
           + LIY+
Sbjct: 444 KVLIYE 449