Miyakogusa Predicted Gene

Lj3g3v0642550.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642550.2 Non Chatacterized Hit- tr|J3LLI1|J3LLI1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,58.21,6e-19,seg,NULL,CUFF.41063.2
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g23950.1                                                       180   4e-46
Glyma07g12380.1                                                       178   1e-45

>Glyma03g23950.1 
          Length = 120

 Score =  180 bits (456), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 81/96 (84%), Positives = 91/96 (94%)

Query: 31  AKSPHPISDAEVRQKKLQCYADIDSLLWGWQCKSSMIARENCALRCLSPACYEVIYQSDP 90
           AKS HPISDA+VR+ KLQCYADIDS LWGW CKS+MIARENCALRCLSPACYE+IY+SDP
Sbjct: 25  AKSSHPISDAQVRKNKLQCYADIDSGLWGWSCKSTMIARENCALRCLSPACYELIYESDP 84

Query: 91  LEEGEKDFIRSQEYKYCMHKLSLGESIEGVRGSFGH 126
           LEEGEKDFIRSQEYKYCMHKLS+GES+EGV+G+F +
Sbjct: 85  LEEGEKDFIRSQEYKYCMHKLSMGESLEGVKGAFSN 120


>Glyma07g12380.1 
          Length = 120

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 91/96 (94%)

Query: 31  AKSPHPISDAEVRQKKLQCYADIDSLLWGWQCKSSMIARENCALRCLSPACYEVIYQSDP 90
           AKS HPISDA+VR+ KLQCYADIDS LWGW CKS++IARENCALRCLSPACYE+IY+SDP
Sbjct: 25  AKSSHPISDAQVRKNKLQCYADIDSGLWGWSCKSTVIARENCALRCLSPACYELIYESDP 84

Query: 91  LEEGEKDFIRSQEYKYCMHKLSLGESIEGVRGSFGH 126
           LEEGEKDFIRSQEYKYCMHKLS+GES+EGV+G+F +
Sbjct: 85  LEEGEKDFIRSQEYKYCMHKLSMGESLEGVKGAFSN 120