Miyakogusa Predicted Gene

Lj3g3v0618130.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0618130.1 tr|Q6ZGY7|Q6ZGY7_ORYSJ Os02g0689500 protein
OS=Oryza sativa subsp. japonica GN=OJ1743_B12.24 PE=2
SV,32.91,4e-17,seg,NULL,CUFF.41050.1
         (285 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g12890.1                                                       206   3e-53
Glyma03g24660.1                                                       190   1e-48
Glyma18g48090.1                                                       133   3e-31
Glyma09g38280.1                                                       114   1e-25

>Glyma07g12890.1 
          Length = 276

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/300 (46%), Positives = 159/300 (53%), Gaps = 39/300 (13%)

Query: 1   MRCKKHLPDLTSTLGVCASCLRERLEPLAEAQAQSPHPATGKSDXXXXXXXXXXXXXXXX 60
           MRCKKHLPDLTST+GVCASCLRERL+PL  AQAQS        D                
Sbjct: 1   MRCKKHLPDLTSTIGVCASCLRERLQPLLAAQAQSERSTNSDVDNNNHRRRKPKLKPEEN 60

Query: 61  ------------YVTXXXXXXXXXXXXLFHSVPEVGQGFSPACDXXXXXXXSKKRIGRFW 108
                       YVT            LF+  P++    + ACD       +++  GRFW
Sbjct: 61  PLPLNFPRSVSPYVTHRKSDCERRRERLFYGTPQMN---AAACDGGAASE-NRRHGGRFW 116

Query: 109 ILSSLFRPRSNKTTEEEDXXXXXXXXXXXXXXXXXXXXXTILPARRQNDQRSCRRQSDRG 168
           ILS+LFR RSNKT                          TIL ARR N    CR  +DRG
Sbjct: 117 ILSNLFRARSNKTESSP-------------SHPPPSWFSTILHARRHN---KCR-HADRG 159

Query: 169 LSPVETVTVTQTESPKIDGRDRSPPGCSSESSPQRRHQTPTVA-RRSRFCPAGKSLTNIA 227
           LSP+  V    TE      +DRS  G SSE SP +++ TP  A RRSR  PAGK L ++A
Sbjct: 160 LSPLTEVE-NFTEFSADTAQDRSDSGISSEDSPAKQNPTPETAHRRSRMGPAGKGLASMA 218

Query: 228 FCLSPLVRASPNRRWGH--KGLAQELSGGLGGPQHISTAVSYCANRSRKLADFGRVAHNR 285
           FCLSPLVRA PNR W +  KGLA EL  G+ G  HIS A S+CANRSRKLADFGR  HNR
Sbjct: 219 FCLSPLVRAGPNRHWSYHNKGLAPEL--GVSGAHHISNAASFCANRSRKLADFGRGTHNR 276


>Glyma03g24660.1 
          Length = 289

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/304 (46%), Positives = 163/304 (53%), Gaps = 34/304 (11%)

Query: 1   MRCKKHLPDLTSTLGVCASCLRERLEPLAEAQAQSPHPA---TGKSDXXXXXXXXXXXXX 57
           MRCKKHLPDLTST+GVCASCLRERL+PL  AQAQ+   +   T  S+             
Sbjct: 1   MRCKKHLPDLTSTIGVCASCLRERLQPLLAAQAQAQAQSERSTTNSNVDNNHRRRKPKPK 60

Query: 58  XXX-------------YVTXXXXXXXXXXXXLFHSVPEVGQGFSPACDXXXXXXXSKKRI 104
                           YVT            LF+S P+V      ACD        ++  
Sbjct: 61  PEENPPPLNFPRSVSPYVTHRKSDYDRLRDRLFYSTPQVS---GAACDGGTALEK-RRHG 116

Query: 105 GRFWILSSLFRPRSNKTTEEEDXXXXXXXXXXXXXXXXXXXXXTILPARRQNDQRSCRRQ 164
           GRFWILS+LFR RSNKT    +                     TIL ARR +D RS R  
Sbjct: 117 GRFWILSNLFRARSNKTESSHEPREDPTGPHPPQSWFS-----TILYARRHHDVRSPR-- 169

Query: 165 SDRGLSPVETVTVTQTESPKIDGRDRSPPGCSSESSPQRRHQTPTVA-RRSRFCPAGKSL 223
           +DRGLSP      TQ  +     +DRS  G SSE+SP +++ TP    RRSR  P GK  
Sbjct: 170 ADRGLSPSTAENFTQFSADS--AQDRSDSGNSSETSPAKQNPTPVTGHRRSRMGPTGKGF 227

Query: 224 TNIAFCLSPLVRASPNRRWGH--KGLAQELSGGLGGPQHISTAVSYCANRSRKLADFGRV 281
           T++AFCL+PLVRA PNR W H  KGLAQE  GG  G  HIS A S+CANRSRKLADFGR 
Sbjct: 228 TSMAFCLNPLVRAGPNRHWSHHNKGLAQEQGGG--GAHHISNAASFCANRSRKLADFGRG 285

Query: 282 AHNR 285
           AHNR
Sbjct: 286 AHNR 289


>Glyma18g48090.1 
          Length = 301

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 142/317 (44%), Gaps = 48/317 (15%)

Query: 1   MRCKKHLPDLTSTLGVCASCLRERLEPLAEAQAQS-PHPATGKSDXXXXXXXXXXXXXXX 59
           M+CKKH  DL+ST+GVCASCLRERL  L  A+  S       ++                
Sbjct: 1   MKCKKHTSDLSSTVGVCASCLRERLIALVAARVISRASDEYSRNSDPNPPPPLIFPRSVS 60

Query: 60  XYVT-----XXXXXXXXXXXXLFHSVPEVGQGFSPACDXXXXXXXS-KKRIGRFWILSSL 113
            YV+                 LF+S P++G  F            S KKR  +F I + +
Sbjct: 61  PYVSRRKPDYAAAWHDDRRDRLFYSTPQLGPTFCAGDSAYHADAKSFKKRFNKFRIFAKI 120

Query: 114 FRPRSNKTTEEEDXXXXXXXXXXXXXXXXXXXXXTILPARRQNDQRSC------------ 161
           FR RS K   +                          P RR+N  R+             
Sbjct: 121 FRTRSEKFQSDP--------SCEQASYASPSWFSAFFPTRRRNKDRTGTTEEYSSSAPRR 172

Query: 162 -RRQSDRGLSPVETVTVTQTESPKIDGRDRSPPGCS--SESSPQRRHQTPTVA---RRSR 215
             R SDRG+SPV T           D  D+SP G    SE+SP  R ++PTVA   RRSR
Sbjct: 173 RYRPSDRGMSPVTTEDFG-------DECDQSPSGSGYVSEASPWWR-RSPTVAPSARRSR 224

Query: 216 FC-PAGKSLTNIAFCLSPLVRASPNRRWGHKGLAQELSGGLGGPQ-----HISTAVSYCA 269
                  S + +A  LSPLVRASPNRRW HKGL  E++            H+S A S+CA
Sbjct: 225 LGHTKSSSGSGMALWLSPLVRASPNRRWNHKGLPPEMAAAAEVRAAAAKPHLSAAASFCA 284

Query: 270 NRSRKLADFGRV-AHNR 285
           NRSRKLADFGRV  HNR
Sbjct: 285 NRSRKLADFGRVNNHNR 301


>Glyma09g38280.1 
          Length = 311

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 112/232 (48%), Gaps = 38/232 (16%)

Query: 76  LFHSVPEVGQGFSPACDXXXXXXXS-KKRIGRFWILSSLFRPRSNKTTEEEDXXXXXXXX 134
           LF+S P++G  F            S KKR  +F I + +FR RS K   +          
Sbjct: 96  LFYSTPQLGPTFCAGDSEYHADAKSFKKRFNKFRIFAKIFRTRSEKFQSDP--------S 147

Query: 135 XXXXXXXXXXXXXTILPARRQNDQRS----------CRRQ---SDRGLSPVETVTVTQTE 181
                           P RR+N  RS           RR+   SDRG+SPV T       
Sbjct: 148 CEQASHASPSWFSAFFPTRRRNKDRSGTTKEYSSAAARRRYRPSDRGMSPVTTEDFG--- 204

Query: 182 SPKIDGRDRSPPGCS--SESSPQRRHQTPTVA---RRSRFC-PAGKSLTNIAFCLSPLVR 235
               D  D+SP G    SE+SP  R +TP VA   RRSR       S + +A CLSPLVR
Sbjct: 205 ----DECDQSPSGSGYVSEASPWWR-RTPAVAPSARRSRLGHTKSASGSGMALCLSPLVR 259

Query: 236 ASPNRRWGHKGLAQELSG--GLGGPQHISTAVSYCANRSRKLADFGRVAHNR 285
           ASPNRRW +KGL  E++         H+S A S+CANRSRKLADFGRV HNR
Sbjct: 260 ASPNRRWNNKGLPPEMAEVRAAAAKPHLSAAASFCANRSRKLADFGRVNHNR 311



 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 24/28 (85%)

Query: 1  MRCKKHLPDLTSTLGVCASCLRERLEPL 28
          M+CKKH  DL+ST+GVCASCLRERL  L
Sbjct: 1  MKCKKHTSDLSSTVGVCASCLRERLISL 28