Miyakogusa Predicted Gene

Lj3g3v0593220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0593220.1 Non Chatacterized Hit- tr|D8RQG8|D8RQG8_SELML
Putative uncharacterized protein OS=Selaginella moelle,42.61,7e-16,no
description,NULL; SUBFAMILY NOT NAMED,NULL; PAX6 NEIGHBOR PROTEIN
(PAXNEB),NULL; seg,NULL; PAXNEB,CUFF.40998.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11400.1                                                       286   9e-78
Glyma03g25730.1                                                       259   1e-69

>Glyma13g11400.1 
          Length = 361

 Score =  286 bits (731), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 139/169 (82%), Positives = 143/169 (84%), Gaps = 1/169 (0%)

Query: 1   MAATXXXXXXXXXXXXTATSQNPGLKHGPNGTTFISSGIPDLDKILGGGFSLGSLVMIME 60
           MAAT            T TSQN GLKHGPNGT FISSGIPDLDKILGGGFSLGSLVM+ME
Sbjct: 1   MAATRARVSSFSRNVSTVTSQNHGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 60

Query: 61  DAEAPHHMLLLRNFMSQGLVHRQPLLYASASRDPKGFLGTLPSPGSSKED-KSRDLGHEK 119
           D EAPHHMLLLRNFMSQGLV +QPLLYASASRDPK FLGTLPSP S K D KS DL HEK
Sbjct: 61  DPEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKSFLGTLPSPASPKGDNKSSDLSHEK 120

Query: 120 DLRIAWQYKKYFGEPQLNVNSNNGGQHDYCNDFDLRKPLDRHFFGGMNV 168
           DLRIAWQYKKYFGEPQLN+N+NNGGQHDYCNDFDLRKPLDRHFF G NV
Sbjct: 121 DLRIAWQYKKYFGEPQLNLNTNNGGQHDYCNDFDLRKPLDRHFFSGNNV 169


>Glyma03g25730.1 
          Length = 296

 Score =  259 bits (661), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 132/168 (78%), Gaps = 11/168 (6%)

Query: 1   MAATXXXXXXXXXXXXTATSQNPGLKHGPNGTTFISSGIPDLDKILGGGFSLGSLVMIME 60
           MAAT            T TSQNPGLKHGPNGT FISSGIPDLDKILGGGFSLGSLVM+ME
Sbjct: 1   MAATRARVSSFSRNVSTVTSQNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 60

Query: 61  DAEAPHHMLLLRNFMSQGLVHRQPLLYASASRDPKGFLGTLPSPGSSKEDKSRDLGHEKD 120
           D EAPHHMLLLRNFMSQGLV +QPLLYASASRDPK FLGTLPS  S K DKS DLG EKD
Sbjct: 61  DPEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKSFLGTLPSLVSPKGDKSSDLGQEKD 120

Query: 121 LRIAWQYKKYFGEPQLNVNSNNGGQHDYCNDFDLRKPLDRHFFGGMNV 168
           LRIAWQYKKYF           GG HDYCNDFDLRKPLDRHFF G+NV
Sbjct: 121 LRIAWQYKKYF-----------GGHHDYCNDFDLRKPLDRHFFSGINV 157