Miyakogusa Predicted Gene

Lj3g3v0579150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0579150.1 tr|A9S1G4|A9S1G4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162323,34.97,1e-16,seg,NULL,CUFF.40990.1
         (496 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g24150.1                                                       715   0.0  
Glyma06g36610.1                                                       702   0.0  

>Glyma12g24150.1 
          Length = 498

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/466 (77%), Positives = 395/466 (84%), Gaps = 11/466 (2%)

Query: 34  SLPFSSTFPKP-CFTRVI-AQAQKPNHNNKRG--PKQGVRVKGNKENVWSFDNELAKMAA 89
           SLP     PKP C TR+I AQ  +PN N+KR   PK+GVRV+GNK+NVWS DNELAK A+
Sbjct: 36  SLPPLGFLPKPSCSTRLITAQDYRPN-NHKRNDYPKEGVRVRGNKDNVWSIDNELAK-AS 93

Query: 90  XXXXXXXXXXXXXXMVKTKRGKGGRVTVTGAMLVEVETVLQTQEPVIKPAWNTFASSLSG 149
                         +V+ K  KGGRV V+GAMLVEVETVLQTQEPVIKP WNTFASSLSG
Sbjct: 94  SSQKEKRRKQRGRRVVRRKGPKGGRVIVSGAMLVEVETVLQTQEPVIKPIWNTFASSLSG 153

Query: 150 IWKGVGAVFSPITAEMEPMEIGRKNENLYDCYTLTRIEEVPSLSGDRTSQIQRTVNWVTL 209
           IWKGVGAVFSPITAEMEPMEIG KNE+LYDCYTL+RIE VPS+SG+RTSQIQR VNWVTL
Sbjct: 154 IWKGVGAVFSPITAEMEPMEIGSKNEHLYDCYTLSRIEAVPSVSGERTSQIQRKVNWVTL 213

Query: 210 NPYGET-QHIEGSKTAKDGTNDLNALTFANENNVLPTFGSFDFERSDVMEEDVMRCEPGL 268
           NPYGE  QHIEGS  AKD  +  +       N+VLP F SFDF+RSDVMEEDVM CEPGL
Sbjct: 214 NPYGEIPQHIEGSNVAKDKQHKSSDNVI---NHVLPIFESFDFKRSDVMEEDVMGCEPGL 270

Query: 269 VYFEDGSYSRGPVNIPVGEYDDSNYYITPTFKFEQCLVKGCHKRIRVVHTIEFINGGSDI 328
           VYFEDGSYSRGP++IPVGEY+D+ YYI+PTFKFEQCLVKGCHKRIR+VHTIEFINGGSDI
Sbjct: 271 VYFEDGSYSRGPIDIPVGEYNDTKYYISPTFKFEQCLVKGCHKRIRIVHTIEFINGGSDI 330

Query: 329 QIMRVAAYEETWDSPANVSDQSDMEFDLEPFSQRKRTKPSELTGSWKVFEVSATPVYSED 388
           QI+RVA YEE W SPA++ DQSD EFD +PFSQRKRTKPSELTGSWKVFEVSATPVY E+
Sbjct: 331 QILRVALYEEEWVSPASIDDQSDTEFDAKPFSQRKRTKPSELTGSWKVFEVSATPVYDEE 390

Query: 389 TKVEEGNDAPYVYLCTENLKKRSFPESTNYFGEEERLDMQDVTMLWLPGGITCYVDVNKD 448
           +  EEGN APYVYLC ENLKKRS PE+TNYFGEEERLDMQDVTMLWLPGG+TCYVD+NKD
Sbjct: 391 S-TEEGNAAPYVYLCMENLKKRSLPENTNYFGEEERLDMQDVTMLWLPGGVTCYVDINKD 449

Query: 449 GVLCIGVGWYSDEGINLVMERDYGLDGKLKEVRSKCEVKRRWSNPP 494
           G+LCIGVGWYSDEGINLVMERDYGLDGKLKEVR K EVKRRWSNPP
Sbjct: 450 GILCIGVGWYSDEGINLVMERDYGLDGKLKEVRWKSEVKRRWSNPP 495


>Glyma06g36610.1 
          Length = 493

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/469 (74%), Positives = 392/469 (83%), Gaps = 14/469 (2%)

Query: 30  NPFTSLPFSSTFPKP-CFTRVI-AQAQKPNHNNKRG-PKQGVRVKGNKENVWSFDNELAK 86
           N  TSL FS   PKP C TR+I AQA +PN++ + G PK+G RV+G+K+N+WS DNELAK
Sbjct: 32  NSLTSLGFS---PKPSCSTRLITAQAYRPNNHKRNGSPKEGARVRGSKDNMWSIDNELAK 88

Query: 87  MAAXXXXXXXXXXXXXXMVKTKRGKGGRVTVTGAMLVEVETVLQTQEPVIKPAWNTFASS 146
            A+              +V+ K  KGGRV V+GAML+EVETVLQT EPVIKP WNTF SS
Sbjct: 89  -ASSSQKEKRRRQRGRSVVRRKGPKGGRVIVSGAMLLEVETVLQTLEPVIKPIWNTFTSS 147

Query: 147 LSGIWKGVGAVFSPITAEMEPMEIGRKNENLYDCYTLTRIEEVPSLSGDRTSQIQRTVNW 206
           LSGIWKGVGAVFSPITAEMEPMEIG KNE+LYDCYTL+RIE VPS+SG+ TSQIQR VNW
Sbjct: 148 LSGIWKGVGAVFSPITAEMEPMEIGSKNEHLYDCYTLSRIEVVPSVSGEHTSQIQRKVNW 207

Query: 207 VTLNPYGET-QHIEGSKTAKDGTNDLNALTFANENNVLPTFGSFDFERSDVMEEDVMRCE 265
           VTLNPYGE  QHI+GS  AKDG +  +       N+VLPTF SFDF+RSDVMEEDVM CE
Sbjct: 208 VTLNPYGEIPQHIKGSNVAKDGQHKSSVNVI---NHVLPTFESFDFKRSDVMEEDVMGCE 264

Query: 266 PGLVYFEDGSYSRGPVNIPVGEYDDSNYYITPTFKFEQCLVKGCHKRIRVVHTIEFINGG 325
           PGLVYFEDGSYSRGP++IPVGEY+D+ YYI+PTFKFEQCLVKGCHKRIR+VHTIEFINGG
Sbjct: 265 PGLVYFEDGSYSRGPIDIPVGEYNDTKYYISPTFKFEQCLVKGCHKRIRIVHTIEFINGG 324

Query: 326 SDIQIMRVAAYEETWDSPANVSDQSDMEFDLEPFSQRKRTKPSELTGSWKVFEVSATPVY 385
           SDIQI+RVA YEE W SPA++  QSDMEFD +PFSQRKRTKPSELTGSWKVFEVSATPVY
Sbjct: 325 SDIQILRVAVYEEEWASPASIDYQSDMEFDAKPFSQRKRTKPSELTGSWKVFEVSATPVY 384

Query: 386 SEDTKVEEGNDAPYVYLCTENLKKRSFPESTNYFGEEERLDMQDVTMLWLPGGITCYVDV 445
            E++  EEGN APY+Y C ENLKKRS P++T+YFGEEERLDMQDVTMLWLPGG+TCYVD+
Sbjct: 385 DEESTAEEGNAAPYMYFCMENLKKRSLPKNTDYFGEEERLDMQDVTMLWLPGGVTCYVDI 444

Query: 446 NKDGVLCIGVGWYSDEGINLVMERDYGLDGKLKEVRSKCEVKRRWSNPP 494
           NK G   IGVGWYSDEGINLVMERDYGLDGKLKEVR K EVKRRWS+PP
Sbjct: 445 NKHG---IGVGWYSDEGINLVMERDYGLDGKLKEVRWKSEVKRRWSSPP 490