Miyakogusa Predicted Gene

Lj3g3v0566080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0566080.2 Non Chatacterized Hit- tr|H3GRN7|H3GRN7_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,26.88,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
CRT-like,Chloroquine resistance transporter-related,CUFF.40988.2
         (429 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10350.1                                                       416   e-116
Glyma14g03990.1                                                       268   7e-72
Glyma07g36010.1                                                       266   2e-71
Glyma04g10430.1                                                       216   5e-56
Glyma04g10480.1                                                       122   7e-28
Glyma02g44740.1                                                        99   1e-20

>Glyma06g10350.1 
          Length = 408

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/323 (66%), Positives = 241/323 (74%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVPM +YPFFLAQ  TFGYV +YFSILY RYR  IVT+EMLAIPK RF+ IG
Sbjct: 86  NRVLYKLALVPMKEYPFFLAQFITFGYVVIYFSILYFRYRARIVTDEMLAIPKLRFVAIG 145

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
           FLEALG+ SGMSAA +LPGPVIPILNQT+LVWQLMFSTLLLRRRYSINQ+ GCLLVA GV
Sbjct: 146 FLEALGLVSGMSAAAVLPGPVIPILNQTFLVWQLMFSTLLLRRRYSINQLVGCLLVAVGV 205

Query: 227 LMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           ++A+TSGSNTGQMLS+V+FFWPALMI+S +FQA AS++KE +FIDS T+LKHKSLDIFVV
Sbjct: 206 VVAITSGSNTGQMLSEVQFFWPALMIISCSFQAWASVMKESIFIDSATQLKHKSLDIFVV 265

Query: 287 NSFGSGXXXXXXXXXXXXXXXXKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPLL 346
           NSFGSG                +GIPF QLPSY KSGAGCFLN+GAD  +C GAPLLPLL
Sbjct: 266 NSFGSGFQALFVLLSLPILSNLRGIPFAQLPSYFKSGAGCFLNLGADNPNCDGAPLLPLL 325

Query: 347 YIVTNLAFNIXXXXXXXXXXXXXXXXXXXXXXXXXXYILSLPLPYLPEATSLSPFFXXXX 406
           Y++ NLAFNI                          YILSLPLPYLPE TSLSPFF    
Sbjct: 326 YVIINLAFNISLLNAVKTSSAVVASLLVMLSVPISVYILSLPLPYLPEGTSLSPFFLLGC 385

Query: 407 XXXXXXXXXXNTTRPARNSSEID 429
                     NTTRP R+SSE D
Sbjct: 386 AILLCGLFLYNTTRPVRSSSEDD 408


>Glyma14g03990.1 
          Length = 401

 Score =  268 bits (686), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 147/297 (49%), Positives = 187/297 (62%), Gaps = 1/297 (0%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+  YPFFLAQL TFGYV VYF+ILYIR+  GIVT+EML  PK  F+++G
Sbjct: 73  NRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHHAGIVTDEMLDAPKAPFIVVG 132

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEAL  A+GM+A  +L G  IPIL+QT+LVWQ++ S + L RRY +NQ+ GC LV  GV
Sbjct: 133 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNQLLGCFLVTIGV 192

Query: 227 LMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHK-SLDIFV 285
           ++ V SG+  G +L +   FW  LMIVS   QA  +++KE +F+DS  +LK    +D+FV
Sbjct: 193 VVTVASGAGAGNLLKEGGMFWSLLMIVSFFLQAADTVLKEIIFLDSSRKLKGGCCMDLFV 252

Query: 286 VNSFGSGXXXXXXXXXXXXXXXXKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPL 345
           VNS+GS                  GIPF QLP+YLK GA CFLN G  +S C GAPLLPL
Sbjct: 253 VNSYGSAFQALFVCLLLPFLSKLWGIPFSQLPNYLKDGAACFLNFGTLSSGCDGAPLLPL 312

Query: 346 LYIVTNLAFNIXXXXXXXXXXXXXXXXXXXXXXXXXXYILSLPLPYLPEATSLSPFF 402
           L+I+ N+ FNI                          Y+ ++PLPYL  A+SL   F
Sbjct: 313 LFIIVNIGFNIALLHLLKISSAVVSCLASTFSVPISIYVFTMPLPYLGVASSLPTGF 369


>Glyma07g36010.1 
          Length = 388

 Score =  266 bits (681), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/292 (50%), Positives = 183/292 (62%), Gaps = 11/292 (3%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVP+ +YPFFLAQL TFGYV VYFSILYIRYR GIVT+EML++PK  FL++G
Sbjct: 76  NRVLYKLALVPLRNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDEMLSVPKTPFLVVG 135

Query: 167 FLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGV 226
            LEALG A+GM+A               +LVWQ++ S   L RRY +NQ+ GC LVA GV
Sbjct: 136 LLEALGAATGMAAGGN-----------AFLVWQILLSYFFLGRRYKVNQLVGCSLVAIGV 184

Query: 227 LMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVV 286
           ++ V SGS  G  L +   FW  LMIVS  FQA  +++KE +F+D+  +LK  SLD+FVV
Sbjct: 185 ILTVVSGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATQKLKGGSLDMFVV 244

Query: 287 NSFGSGXXXXXXXXXXXXXXXXKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPLL 346
           NSFGS                  GIPF QLP+YLK GA CFLN+G  + +C GAPLLPLL
Sbjct: 245 NSFGSAFQALFICLLLPFLSKLWGIPFGQLPNYLKDGAACFLNVGTLSRACDGAPLLPLL 304

Query: 347 YIVTNLAFNIXXXXXXXXXXXXXXXXXXXXXXXXXXYILSLPLPYLPEATSL 398
           +++ N+ FNI                          Y+ +LPLPYL  A+SL
Sbjct: 305 FVIVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIYVFTLPLPYLGVASSL 356


>Glyma04g10430.1 
          Length = 191

 Score =  216 bits (549), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 111/191 (58%), Positives = 123/191 (64%)

Query: 239 MLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVVNSFGSGXXXXXX 298
           MLS+V+FFWPALMI+S +FQA AS+IKE++FIDS TRLKHKSLDIFVVNSFGSG      
Sbjct: 1   MLSEVQFFWPALMIISCSFQALASVIKEYIFIDSATRLKHKSLDIFVVNSFGSGFQALFV 60

Query: 299 XXXXXXXXXXKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPLLYIVTNLAFNIXX 358
                     +GIPF QLPSY KSGAGCFLN+GAD  +C GAPLLPLLY++ NLAFNI  
Sbjct: 61  LLSLPILSNLRGIPFDQLPSYFKSGAGCFLNLGADNPNCYGAPLLPLLYVIINLAFNISL 120

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXYILSLPLPYLPEATSLSPFFXXXXXXXXXXXXXXNT 418
                                   YILSLPLPYLPE TSLSPFF              NT
Sbjct: 121 LNAVKTSSAVVASLLVMLSVPISVYILSLPLPYLPEGTSLSPFFLFGGAILLCGLFLYNT 180

Query: 419 TRPARNSSEID 429
           TRP RNSSE D
Sbjct: 181 TRPVRNSSEDD 191


>Glyma04g10480.1 
          Length = 214

 Score =  122 bits (306), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 64/74 (86%)

Query: 107 NRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIG 166
           NRVLYKLALVPM +YPFFLAQ  TFGYV +YFSILY RYR  IVT+EMLAIPK RF+ IG
Sbjct: 84  NRVLYKLALVPMKEYPFFLAQFITFGYVVIYFSILYFRYRARIVTDEMLAIPKLRFVAIG 143

Query: 167 FLEALGVASGMSAA 180
           FLEALG+ SGMSAA
Sbjct: 144 FLEALGLVSGMSAA 157


>Glyma02g44740.1 
          Length = 228

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 70/125 (56%), Gaps = 8/125 (6%)

Query: 240 LSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKS-LDIFVVNSFGSGXXXXXX 298
           L +   FW  LMIVS   QA  +++ E +F+DS  +LK    +D+FVVNS+GS       
Sbjct: 50  LKEGGMFWSLLMIVSFFLQAAETVLMEIIFLDSSRKLKGGCCMDLFVVNSYGSAFQVEYM 109

Query: 299 XX-------XXXXXXXXKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPLLYIVTN 351
                             G P  QLP+YLK GA CFL++G  TS C GAPLLPLL+I+ N
Sbjct: 110 LSVGTIRMPSSSLLVKIMGHPLSQLPNYLKDGAACFLDVGTLTSGCDGAPLLPLLFIIVN 169

Query: 352 LAFNI 356
           + FNI
Sbjct: 170 IGFNI 174