Miyakogusa Predicted Gene

Lj3g3v0537460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537460.1 Non Chatacterized Hit- tr|A5BAD7|A5BAD7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,48.25,2e-18,
,CUFF.40940.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g33430.1                                                       165   2e-41
Glyma02g15030.1                                                       162   2e-40
Glyma11g06040.1                                                        82   2e-16
Glyma01g39230.1                                                        80   7e-16

>Glyma07g33430.1 
          Length = 135

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/117 (74%), Positives = 98/117 (83%), Gaps = 7/117 (5%)

Query: 39  MDPRISFSHDFVVGQQPMKHENIYREAPVSSDFEFSVKNYSMIPADEVFSQGMLLPL--- 95
           MDPRISFS+DFVV QQ +KHENIYRE PVSSDFEFSVKN SMI ADEVF QGMLLPL   
Sbjct: 1   MDPRISFSYDFVVSQQAIKHENIYREDPVSSDFEFSVKNNSMISADEVFFQGMLLPLKSD 60

Query: 96  --NKKVTLRDELLVNDDYGKDLPRLSKSYSSRWKERFGLKRIGSKKEKHK-SDGFLQ 149
             NKKVTLRDELLVNDDY ++LPR+ KS SSRWK+R GL+R  SKK+K+K ++GF Q
Sbjct: 61  CSNKKVTLRDELLVNDDYEEELPRIPKS-SSRWKQRLGLRRGSSKKDKNKNNEGFQQ 116


>Glyma02g15030.1 
          Length = 136

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 98/118 (83%), Gaps = 8/118 (6%)

Query: 39  MDPRISFSHDFVVGQQPMKHENIYREAPVSSDFEFSVKNYSMIPADEVFSQGMLLPL--- 95
           MDPRISFS+DFVV QQ +KHENIYRE PVSSDFEFSVKN SMI ADEVF QGMLLPL   
Sbjct: 1   MDPRISFSYDFVVSQQAIKHENIYREDPVSSDFEFSVKNNSMISADEVFFQGMLLPLKSD 60

Query: 96  --NKKVTLRDELLVNDD-YGKDLPRLSKSYSSRWKERFGLKRIGSKKEKHK-SDGFLQ 149
             NKKVTLRDELLVNDD Y ++LPRL KS SSRWKER GL++  SKK+K+K ++GF Q
Sbjct: 61  CSNKKVTLRDELLVNDDHYEEELPRLPKS-SSRWKERLGLRKGSSKKDKNKNNEGFQQ 117


>Glyma11g06040.1 
          Length = 183

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 71/121 (58%), Gaps = 20/121 (16%)

Query: 39  MDPRISFSHDFVVGQQPMKHE-----NIYREAPVSSDFEFSVKNYSMIPADEVFSQGMLL 93
           M PRISFS+DFV  QQ MK +     +   + PVSSDFEFSV NY+M+ ADE+F +G L+
Sbjct: 30  MSPRISFSNDFVDVQQAMKLQEQRGGSSRSDTPVSSDFEFSVANYTMMSADELFFKGRLM 89

Query: 94  P-----------LNKKVTLRDELLVNDD-YGKDLP-RLSKSYSSRWKERFGLKR--IGSK 138
                            TL++ELL+NDD Y  +   R  K  S+RWK   GL++  IGSK
Sbjct: 90  SSTYVNTDNNNQQRATTTLKEELLINDDEYDHNFSLRPPKPSSTRWKGLLGLRKSHIGSK 149

Query: 139 K 139
           K
Sbjct: 150 K 150


>Glyma01g39230.1 
          Length = 205

 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 32/140 (22%)

Query: 39  MDPRISFSHDFVVGQQPMKHE---NIYREAPVSSDFEFSVKNYSMIPADEVFSQGMLLPL 95
           M PRISFS+DFV  +Q MK E   +   +APVSSDFEFSV NYSM+ ADE+F +G L+  
Sbjct: 26  MSPRISFSNDFVDVKQAMKQEQRGSSRSDAPVSSDFEFSVANYSMMSADELFFKGRLMST 85

Query: 96  -------------------------NKKVTLRDELLVN-DDYGKDLP-RLSKSYSSRWKE 128
                                        TL++ELL+N DD+  D   R  K  S+RWK 
Sbjct: 86  YNKDNCNNNNKNNHMMMMQQQRATTTTTTTLKEELLINDDDHDHDFSLRPPKPSSTRWKG 145

Query: 129 RFGLKR--IGSKKEKHKSDG 146
             GL++  IGSKK    ++G
Sbjct: 146 LLGLRKTHIGSKKPHKSTEG 165