Miyakogusa Predicted Gene

Lj3g3v0537380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537380.1 tr|A9TR90|A9TR90_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96103
,34.39,6e-17,seg,NULL,CUFF.40938.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g14990.1                                                       218   3e-57
Glyma07g33470.1                                                       216   2e-56

>Glyma02g14990.1 
          Length = 183

 Score =  218 bits (555), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/198 (59%), Positives = 134/198 (67%), Gaps = 23/198 (11%)

Query: 1   MRMFSTNASSSVF--------RCRASAGDLSPFPRLFHXXXXXXXXXXXXXXXXXXQTPD 52
           MRMF+TNA+S++F        RCRA+AGDLS  P                      Q PD
Sbjct: 1   MRMFATNATSNLFFPCSPSSFRCRAAAGDLSAGPSFIQSVAGGLRIG---------QFPD 51

Query: 53  XXXXXXXXXXXXXXXXNDGVRVKAKEKKWSRNRESYLVDDAEPLPLPMTHPDSSPVSREE 112
                           N+ +RVK    KWSR  ESYL +DAEPLPLPMT+PDSSPVS+EE
Sbjct: 52  GAGLAVEGRRGGGG--NEPIRVK----KWSRKNESYLDNDAEPLPLPMTYPDSSPVSQEE 105

Query: 113 IDKRLRCDPKTEDCKEVVYEWTGECRSCQGSRYMSYYNKRGKELTSKCIPCMGIGYVQKI 172
           IDKRL+CDP+ +DCKEVVYEWTG+CRSCQGS Y+SYY KRGK +T KCIPCMGIGYVQKI
Sbjct: 106 IDKRLQCDPQIQDCKEVVYEWTGKCRSCQGSGYVSYYGKRGKPVTCKCIPCMGIGYVQKI 165

Query: 173 TARKGIDQMEDLDNGKPP 190
           TARK ID MEDL+NGKPP
Sbjct: 166 TARKDIDVMEDLENGKPP 183


>Glyma07g33470.1 
          Length = 180

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/196 (58%), Positives = 132/196 (67%), Gaps = 24/196 (12%)

Query: 3   MFSTNASSSVF--------RCRASAGDLSPFPRLFHXXXXXXXXXXXXXXXXXXQTPDXX 54
           MF+TNA+S++F        RCRA+AGDLS  P  F                   Q PD  
Sbjct: 1   MFATNAASNLFFPGNPSSFRCRAAAGDLSAGPSFFQSVAGGLRIG---------QFPDGA 51

Query: 55  XXXXXXXXXXXXXXNDGVRVKAKEKKWSRNRESYLVDDAEPLPLPMTHPDSSPVSREEID 114
                         N+ +RVK    KWSR  ESYL +D EPLPLPMT+PDSSPVS+EEID
Sbjct: 52  GLVVEGRRGGG---NEPIRVK----KWSRKNESYLDNDTEPLPLPMTYPDSSPVSQEEID 104

Query: 115 KRLRCDPKTEDCKEVVYEWTGECRSCQGSRYMSYYNKRGKELTSKCIPCMGIGYVQKITA 174
           KRL+CDP+ +DCKEVVYEWTG+CRSCQGS Y+SYY KRGK +T KCIPCMGIGYVQKITA
Sbjct: 105 KRLQCDPQIQDCKEVVYEWTGKCRSCQGSGYVSYYGKRGKAVTCKCIPCMGIGYVQKITA 164

Query: 175 RKGIDQMEDLDNGKPP 190
           RK ID MEDL+NGKPP
Sbjct: 165 RKDIDVMEDLENGKPP 180